5VTA
Co-Crystal Structure of DPPIV with a Chemibody Inhibitor
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00930,PF18811 | e5vtaA2 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 8-bladed | F: PF00930,PF18811 | ECOD (1.6) |
A | PF00326 | e5vtaA1 | A: a/b three-layered sandwiches | X: alpha/beta-Hydrolases (From Topology) | H: alpha/beta-Hydrolases (From Topology) | T: alpha/beta-Hydrolases | F: PF00326 | ECOD (1.6) |
B | PF00930,PF18811 | e5vtaB2 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 8-bladed | F: PF00930,PF18811 | ECOD (1.6) |
B | PF00326 | e5vtaB1 | A: a/b three-layered sandwiches | X: alpha/beta-Hydrolases (From Topology) | H: alpha/beta-Hydrolases (From Topology) | T: alpha/beta-Hydrolases | F: PF00326 | ECOD (1.6) |
D | PF00930,PF18811 | e5vtaD2 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 8-bladed | F: PF00930,PF18811 | ECOD (1.6) |
D | PF00326 | e5vtaD1 | A: a/b three-layered sandwiches | X: alpha/beta-Hydrolases (From Topology) | H: alpha/beta-Hydrolases (From Topology) | T: alpha/beta-Hydrolases | F: PF00326 | ECOD (1.6) |
C | PF00930,PF18811 | e5vtaC1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 8-bladed | F: PF00930,PF18811 | ECOD (1.6) |
C | PF00326 | e5vtaC2 | A: a/b three-layered sandwiches | X: alpha/beta-Hydrolases (From Topology) | H: alpha/beta-Hydrolases (From Topology) | T: alpha/beta-Hydrolases | F: PF00326 | ECOD (1.6) |
E [auth L] | PF07654 | e5vtaL1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
E [auth L] | PF07686 | e5vtaL2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
I [auth G] | PF07686 | e5vtaG1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
K [auth J] | PF07686 | e5vtaJ1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
F [auth E] | PF07654 | e5vtaE2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
F [auth E] | PF07686 | e5vtaE1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
G [auth H] | PF07654 | e5vtaH2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
G [auth H] | PF07686 | e5vtaH1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
H [auth F] | PF07654 | e5vtaF1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
H [auth F] | PF07686 | e5vtaF2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
L [auth K] | PF07686 | e5vtaK1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
J [auth I] | PF07686 | e5vtaI1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
E [auth L], F [auth E], I [auth G], K [auth J] | Fab 11A19 | L-KAPPA | Mus musculus (house mouse) | IGKV4-72*01, IGKJ1*01, IGKJ2*01, IGKC*03 | V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA | IG | FAB-GAMMA-1_KAPPA | IMGT (202416-0) |
G [auth H], H [auth F], J [auth I], L [auth K] | Fab 11A19 | VH-CH1 | Mus musculus (house mouse) | IGHV1-39*01, IGHJ1*03, IGHG1*02 | V-DOMAIN VH, C-DOMAIN CH1 | IG | FAB-GAMMA-1_KAPPA | IMGT (202416-0) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
E [auth L], F [auth E], I [auth G], K [auth J] | Light Chain | IGKV4 | Kappa | dipeptidyl peptidase 4 | SAbDab (2024-04-26) |
G [auth H], H [auth F], J [auth I], L [auth K] | Heavy Chain | IGHV1 | - | dipeptidyl peptidase 4 | SAbDab (2024-04-26) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00930 | Dipeptidyl peptidase IV (DPP IV) N-terminal region (DPPIV_N) | Dipeptidyl peptidase IV (DPP IV) N-terminal region | - | Repeat | |
PF00326 | Prolyl oligopeptidase family (Peptidase_S9) | Prolyl oligopeptidase family | - | Domain | |
PF18811 | Dipeptidyl peptidase IV (DPP IV) low complexity region (DPPIV_rep) | Dipeptidyl peptidase IV (DPP IV) low complexity region | - | Repeat | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001375 | Peptidase S9, prolyl oligopeptidase, catalytic domain | Domain | |
IPR040522 | Dipeptidyl peptidase 4, low complexity region | Domain | |
IPR029058 | Alpha/Beta hydrolase fold | Homologous Superfamily | |
IPR002471 | Peptidase S9, serine active site | Active Site | |
IPR002469 | Dipeptidylpeptidase IV, N-terminal domain | Domain |