Crystal structure of Taurine dioxygenase from Burkholderia ambifaria
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d5vn6b_ | All beta proteins | Double-stranded beta-helix | Clavaminate synthase-like | automated matches | automated matches | (Burkholderia ambifaria MC40-6 ) [TaxId: 398577 ], | SCOPe (2.08) |
| A | d5vn6a_ | All beta proteins | Double-stranded beta-helix | Clavaminate synthase-like | automated matches | automated matches | (Burkholderia ambifaria MC40-6 ) [TaxId: 398577 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B | SCOP2B Superfamily | Clavaminate synthase-like | 8080568 | 3001848 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | TauD/TfdA-like | 8080567 | 4002161 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Clavaminate synthase-like | 8080568 | 3001848 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | MTPAP-like_central | e5vn6B1 | A: alpha arrays | X: Profilin-like | H: Nucleotidyltransferase | T: Nucleotidyltransferase | F: MTPAP-like_central | ECOD (v295.2) |
| A | MTPAP-like_central | e5vn6A1 | A: alpha arrays | X: Profilin-like | H: Nucleotidyltransferase | T: Nucleotidyltransferase | F: MTPAP-like_central | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.60.130.10 | Alpha Beta | 4-Layer Sandwich | Double-stranded beta-helix | Clavaminate synthase-like | CATH (4.3.0) |
| A | 3.60.130.10 | Alpha Beta | 4-Layer Sandwich | Double-stranded beta-helix | Clavaminate synthase-like | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Taurine dioxygenase | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR003819 | TauD/TfdA-like domain | Domain | |
| IPR051323 | Alpha-ketoglutarate-dependent sulfate ester dioxygenase-like | Family | |
| IPR042098 | Glutarate 2-hydroxylase superfamily | Homologous Superfamily |