5VEI | pdb_00005vei

Crystal structure of the SH3 domain of human sorbin and SH3 domain-containing protein 2

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	SH3-domain	8065164	4000369	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	SH3-domain	8065165	3000153	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Rogdi_lz	e5veiA1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Class I glutamine amidotransferase-like	T: Chelatase-like	F: Rogdi_lz	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.30.30.40	Mainly Beta	Roll	SH3 type barrels.	SH3 Domains	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00018	SH3 domain (SH3_1)	SH3 domain	SH3 (Src homology 3) domains are often indicative of a protein involved in signal transduction related to cytoskeletal organisation. First described in the Src cytoplasmic tyrosine kinase Swiss:P12931. The structure is a partly opened beta barrel.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Sorbin and SH3 domain-containing protein 2	structural molecule activity structural constituent of muscle structural constituent of cytoskeleton protein-macromolecule adaptor activity cytoskeletal anchor activity molecular adaptor activity RNA binding binding nucleic acid binding identical protein binding protein binding	multicellular organismal process system process cellular developmental process cardiac muscle cell development developmental growth cell development organ growth muscle cell differentiation cell growth striated muscle tissue development muscle structure development multicellular organism development striated muscle cell development muscle cell development cell differentiation multicellular organismal process system process cellular developmental process cardiac muscle cell development developmental growth cell development organ growth muscle cell differentiation cell growth striated muscle tissue development muscle structure development multicellular organism development striated muscle cell development muscle cell development cell differentiation cardiac muscle hypertrophy anatomical structure development cardiac cell development muscle tissue development cardiac muscle tissue growth system development developmental process muscle hypertrophy heart development heart growth developmental cell growth cardiac muscle tissue development physiological muscle hypertrophy growth animal organ development cardiac muscle cell differentiation striated muscle hypertrophy tissue development muscle system process cardiocyte differentiation circulatory system development cell growth involved in cardiac muscle cell development physiological cardiac muscle hypertrophy cellular process striated muscle cell differentiation cellular response to stimulus regulation of biological process regulation of cellular process cell surface receptor signaling pathway response to stimulus signaling biological regulation cell communication Notch signaling pathway signal transduction	cellular anatomical structure anchoring junction cell junction focal adhesion cell-substrate junction cell projection cell leading edge plasma membrane bounded cell projection lamellipodium intracellular anatomical structure intracellular membraneless organelle Z disc sarcomere intracellular organelle cellular anatomical structure anchoring junction cell junction focal adhesion cell-substrate junction cell projection cell leading edge plasma membrane bounded cell projection lamellipodium intracellular anatomical structure intracellular membraneless organelle Z disc sarcomere intracellular organelle I band organelle membraneless organelle contractile muscle fiber cytoplasm supramolecular fiber myofibril supramolecular polymer supramolecular complex cell periphery apical part of cell membrane plasma membrane plasma membrane region apical plasma membrane cytoskeleton actin cytoskeleton synapse perinuclear region of cytoplasm somatodendritic compartment cell body neuronal cell body dendrite dendritic tree neuron projection membrane-bounded organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR013087	Zinc finger C2H2-type	Domain
A	IPR003127	SoHo domain	Domain
A	IPR001452	SH3 domain	Domain
A	IPR050384	Endophilin/SH3RF	Family
A	IPR036028	SH3-like domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: O94875	Weight Gain pancreatic ductal adenocarcinoma pituitary cancer subependymal giant cell astrocytoma adrenal cortex carcinoma breast carcinoma glioblastoma juvenile dermatomyositis malignant glioma nasopharyngeal carcinoma osteosarcoma pancreatic intraductal papillary-mucinous carcinoma psoriasis astrocytic tumor cystic fibrosis Weight Gain pancreatic ductal adenocarcinoma pituitary cancer subependymal giant cell astrocytoma adrenal cortex carcinoma breast carcinoma glioblastoma juvenile dermatomyositis malignant glioma nasopharyngeal carcinoma osteosarcoma pancreatic intraductal papillary-mucinous carcinoma psoriasis astrocytic tumor cystic fibrosis heart disease large cell medulloblastoma malignant pancreatic neoplasm non-small cell lung carcinoma ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia Sjogren syndrome breast cancer Emery-Dreifuss muscular dystrophy invasive ductal breast carcinoma lung carcinoma medulloblastoma oligodendroglioma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.