5V90
Crystal structure of ERp29 D-domain in complex with the P-domain of calreticulin
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth C] | SCOP2B Superfamily | ERP29 C domain-like | 8081912 | 3000722 | SCOP2B (2022-06-29) |
B [auth A] | SCOP2B Superfamily | ERP29 C domain-like | 8081912 | 3000722 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth C] | ERp29 | e5v90C1 | A: alpha arrays | X: ERP29 C domain-like | H: ERP29 C domain-like (From Topology) | T: ERP29 C domain-like | F: ERp29 | ECOD (1.6) |
B [auth A] | ERp29 | e5v90A1 | A: alpha arrays | X: ERP29 C domain-like | H: ERP29 C domain-like (From Topology) | T: ERP29 C domain-like | F: ERp29 | ECOD (1.6) |
C [auth B] | Calreticulin_2nd_1 | e5v90B1 | A: few secondary structure elements | X: P-domain of calnexin/calreticulin (From Topology) | H: P-domain of calnexin/calreticulin (From Topology) | T: P-domain of calnexin/calreticulin | F: Calreticulin_2nd_1 | ECOD (1.6) |
D | Calreticulin_2nd_1 | e5v90D1 | A: few secondary structure elements | X: P-domain of calnexin/calreticulin (From Topology) | H: P-domain of calnexin/calreticulin (From Topology) | T: P-domain of calnexin/calreticulin | F: Calreticulin_2nd_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth C] | 1.20.1150.12 | Mainly Alpha | Up-down Bundle | Endoplasmic reticulum protein erp29 | Endoplasmic reticulum resident protein 29, C-terminal domain | CATH (4.3.0) |
B [auth A] | 1.20.1150.12 | Mainly Alpha | Up-down Bundle | Endoplasmic reticulum protein erp29 | Endoplasmic reticulum resident protein 29, C-terminal domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth C], B [auth A] | PF07749 | Endoplasmic reticulum protein ERp29, C-terminal domain (ERp29) | Endoplasmic reticulum protein ERp29, C-terminal domain | ERp29 is a ubiquitously expressed endoplasmic reticulum protein found in mammals. ERp29 is comprised of two domains. This domain, the C-terminal domain, has an all helical fold [1]. ERp29 is thought to form part of the thyroglobulin folding complex ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth C], B [auth A] | IPR016855 | Endoplasmic reticulum resident protein 29 | Family |
A [auth C], B [auth A] | IPR012883 | ERp29, N-terminal | Domain |
A [auth C], B [auth A] | IPR011679 | Endoplasmic reticulum resident protein 29, C-terminal | Domain |
A [auth C], B [auth A] | IPR036356 | Endoplasmic reticulum resident protein 29, C-terminal domain superfamily | Homologous Superfamily |
A [auth C], B [auth A] | IPR036249 | Thioredoxin-like superfamily | Homologous Superfamily |
C [auth B], D | IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily | Homologous Superfamily |
C [auth B], D | IPR009169 | Calreticulin | Family |
C [auth B], D | IPR001580 | Calreticulin/calnexin | Family |
C [auth B], D | IPR018124 | Calreticulin/calnexin, conserved site | Conserved Site |
C [auth B], D | IPR009033 | Calreticulin/calnexin, P domain superfamily | Homologous Superfamily |