PRDM9-allele-C ZnF8-13
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| G | SCOP2 Family | Classic zinc finger, C2H2 | 8064789 | 4003583 | SCOP2 (2022-06-29) |
| G | SCOP2 Superfamily | beta-beta-alpha zinc fingers | 8064790 | 3001077 | SCOP2 (2022-06-29) |
| F [auth A] | SCOP2B Superfamily | beta-beta-alpha zinc fingers | 8064790 | 3001077 | SCOP2B (2022-06-29) |
| C [auth D] | SCOP2B Superfamily | beta-beta-alpha zinc fingers | 8064790 | 3001077 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| G | zf-C2H2_1 | e5v3gG1 | A: few secondary structure elements | X: beta-beta-alpha zinc fingers | H: beta-beta-alpha zinc fingers (From Topology) | T: beta-beta-alpha zinc fingers | F: zf-C2H2_1 | ECOD (1.6) |
| F [auth A] | zf-C2H2_15 | e5v3gA3 | A: few secondary structure elements | X: beta-beta-alpha zinc fingers | H: beta-beta-alpha zinc fingers (From Topology) | T: beta-beta-alpha zinc fingers | F: zf-C2H2_15 | ECOD (1.6) |
| F [auth A] | zf-C2H2_1 | e5v3gA2 | A: few secondary structure elements | X: beta-beta-alpha zinc fingers | H: beta-beta-alpha zinc fingers (From Topology) | T: beta-beta-alpha zinc fingers | F: zf-C2H2_1 | ECOD (1.6) |
| C [auth D] | zf-C2H2_15 | e5v3gD1 | A: few secondary structure elements | X: beta-beta-alpha zinc fingers | H: beta-beta-alpha zinc fingers (From Topology) | T: beta-beta-alpha zinc fingers | F: zf-C2H2_15 | ECOD (1.6) |
| C [auth D] | zf-C2H2_1 | e5v3gD3 | A: few secondary structure elements | X: beta-beta-alpha zinc fingers | H: beta-beta-alpha zinc fingers (From Topology) | T: beta-beta-alpha zinc fingers | F: zf-C2H2_1 | ECOD (1.6) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| A [auth E], D [auth B] | DNA (5'-D(*TP*GP*AP*CP*CP*CP*CP*AP*GP*TP*GP*AP*GP*CP*GP*TP*TP*GP*CP*CP*C)-3') | - | - | - |
| C [auth D], F [auth A], G | PR domain zinc finger protein 9 | |||
| B [auth F], E [auth C] | DNA (5'-D(*AP*GP*GP*GP*CP*AP*AP*CP*GP*CP*TP*CP*AP*CP*TP*GP*GP*GP*GP*TP*C)-3') | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| C [auth D], F [auth A], G | IPR013087 | Zinc finger C2H2-type | Domain |
| C [auth D], F [auth A], G | IPR036236 | Zinc finger C2H2 superfamily | Homologous Superfamily |
