5V1U | pdb_00005v1u

TbiB1 in Complex with the TbiA(beta) Leader Peptide

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Winged helix DNA-binding domain	8090249	3000034	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Winged helix DNA-binding domain	8090249	3000034	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Winged helix DNA-binding domain	8090249	3000034	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Winged helix DNA-binding domain	8090249	3000034	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PqqD	e5v1uA1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: PqqD	ECOD (1.6)
D	PqqD	e5v1uD1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: PqqD	ECOD (1.6)
C	PqqD	e5v1uC1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: PqqD	ECOD (1.6)
B	PqqD	e5v1uB1	A: alpha arrays	X: HTH	H: HTH	T: winged	F: PqqD	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF05402	Coenzyme PQQ synthesis protein D (PqqD) (PqqD)	Coenzyme PQQ synthesis protein D (PqqD)	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
E, F, G, H	TbiA(beta) Thr(-5)Glu Leader	-	-	-
A, B, C, D	TbiB1	cation binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR008792	Coenzyme PQQ synthesis protein D	Family
A, B, C, D	IPR041881	Coenzyme PQQ synthesis protein D superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.