5UR2 | pdb_00005ur2

Crystal structure of proline utilization A (PutA) from Bdellovibrio bacteriovorus inactivated by N-propargylglycine


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DRogdi_lze5ur2D1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Chelatase-likeF: Rogdi_lzECOD (v294.1)
CRogdi_lze5ur2C1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Chelatase-likeF: Rogdi_lzECOD (v294.1)
BRogdi_lze5ur2B1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Chelatase-likeF: Rogdi_lzECOD (v294.1)
ARogdi_lze5ur2A1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: Chelatase-likeF: Rogdi_lzECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF00171Aldehyde dehydrogenase family (Aldedh)Aldehyde dehydrogenase family- Family
A, B, C, D
PF01619Proline dehydrogenase (Pro_dh)Proline dehydrogenase- Family
A, B, C, D
PF18083Proline utilization A N-terminal domain (PutA_N)Proline utilization A N-terminal domainThis domain is found in Proline utilization A (PutA) proteins present in Geobacter sulfurreducens. PutA are bifunctional peripheral membrane flavoenzymes that catalyze the oxidation of l-proline to l-glutamate and couple the oxidation of imported pro ...This domain is found in Proline utilization A (PutA) proteins present in Geobacter sulfurreducens. PutA are bifunctional peripheral membrane flavoenzymes that catalyze the oxidation of l-proline to l-glutamate and couple the oxidation of imported proline imported to the reduction of membrane-associated quinones. This domain is located at the N-terminus and is referred to as the alpha domain. The hydrocarbon tail of Zwittergent 3-12 binds to an exposed hydrophobic patch of the alpha domain which contains aromatic and nonpolar residues. The domain may be involved in membrane association [1].
Domain