5UL4 | pdb_00005ul4

Structure of Cobalamin-dependent S-adenosylmethionine radical enzyme OxsB with aqua-cobalamin and S-adenosylmethionine bound


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AUNK_F_TYPEe5ul4A4 A: alpha bundlesX: Bromodomain-likeH: OxsB C-terminal helix bundle (From Topology)T: OxsB C-terminal helix bundleF: UNK_F_TYPEECOD (1.6)
AUNK_F_TYPEe5ul4A1 A: a+b two layersX: OxsB N-terminal domain (From Topology)H: OxsB N-terminal domain (From Topology)T: OxsB N-terminal domainF: UNK_F_TYPEECOD (1.6)
ARadical_SAMe5ul4A3 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: Radical_SAMECOD (1.6)
AB12-bindinge5ul4A2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Class I glutamine amidotransferase-likeT: CheY-likeF: B12-bindingECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF04055Radical SAM superfamily (Radical_SAM)Radical SAM superfamilyRadical SAM proteins catalyse diverse reactions, including unusual methylations, isomerisation, sulphur insertion, ring formation, anaerobic oxidation and protein radical formation. Domain