Crystal structure of DHDPS from chlamydomonas reinhardtii
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A [auth D] | d5ui3d_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Aldolase | automated matches | automated matches | (Chlamydomonas reinhardtii ) [TaxId: 3055 ], | SCOPe (2.08) |
| C [auth B] | d5ui3b_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Aldolase | automated matches | automated matches | (Chlamydomonas reinhardtii ) [TaxId: 3055 ], | SCOPe (2.08) |
| B [auth A] | d5ui3a_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Aldolase | automated matches | automated matches | (Chlamydomonas reinhardtii ) [TaxId: 3055 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B [auth A] | SCOP2 Family | Class I aldolase | 8059142 | 4003216 | SCOP2 (2022-06-29) |
| B [auth A] | SCOP2 Superfamily | Aldolase | 8059143 | 3000445 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A [auth D] | ATP-synt_VA_C | e5ui3D1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: ATP-synt_VA_C | ECOD (v295.2) |
| D [auth C] | Bromodomain | e5ui3C1 | A: alpha arrays | X: Cryptochrome/photolyase FAD-binding domain-related | H: Cryptochrome/photolyase FAD-binding domain-related | T: PriX | F: Bromodomain | ECOD (v295.2) |
| C [auth B] | ATP-synt_VA_C | e5ui3B1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: ATP-synt_VA_C | ECOD (v295.2) |
| B [auth A] | ATP-synt_VA_C | e5ui3A1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: ATP-synt_VA_C | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A [auth D] | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (4.3.0) |
| D [auth C] | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (4.3.0) |
| C [auth B] | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (4.3.0) |
| B [auth A] | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| A [auth D], B [auth A], C [auth B], D [auth C] | PF00701 | Dihydrodipicolinate synthetase family (DHDPS) | Dihydrodipicolinate synthetase family | This family has a TIM barrel structure. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| A [auth D], B [auth A], C [auth B], D [auth C] | Dihydrodipicolinate synthase | - | - |