Skip to main content

 5TP3 | pdb_00005tp3

Crystal structure of the RSV-neutralizing single-domain antibody F-VHH-4

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad5tp3a1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) automated matches llama (Lama glama ) [TaxId: 9844 ], SCOPe (2.08)
Ad5tp3a2 Artifacts Tags Tags Tags N-terminal Tags llama (Lama glama ) [TaxId: 9844 ], SCOPe (2.08)
Bd5tp3b1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) automated matches llama (Lama glama ) [TaxId: 9844 ], SCOPe (2.08)
Bd5tp3b2 Artifacts Tags Tags Tags N-terminal Tags llama (Lama glama ) [TaxId: 9844 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AMCM_Ne5tp3A1 A: alpha arraysX: helical bundle domain in reverse transcriptase-like polymerasesH: helical bundle domain in reverse transcriptase-like polymerasesT: CARF (CRISPR-associated Rossmann fold) domainsF: MCM_NECOD (v295.2)
BMCM_Ne5tp3B1 A: alpha arraysX: helical bundle domain in reverse transcriptase-like polymerasesH: helical bundle domain in reverse transcriptase-like polymerasesT: CARF (CRISPR-associated Rossmann fold) domainsF: MCM_NECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
B2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
A, B
F-VHH-4, neutralizing VH Lama glama (llama) IGHV3S1*01, IGHJ4*01 V-DOMAIN VH IG VH IMGT (202638-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
A, B
Heavy ChainIGHV1 --SAbDab (2026-10-02)