5TOU

STRUCTURE OF C-PHYCOCYANIN FROM ARCTIC PSEUDANABAENA SP. LW0831

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A [auth C]	d5touc_	All alpha proteins	Globin-like	Globin-like	Phycocyanin-like phycobilisome proteins	automated matches	(Pseudanabaena sp. lw0831 ) [TaxId: 1357935 ],	SCOPe (2.08)
C [auth A]	d5toua_	All alpha proteins	Globin-like	Globin-like	Phycocyanin-like phycobilisome proteins	automated matches	(Pseudanabaena sp. lw0831 ) [TaxId: 1357935 ],	SCOPe (2.08)
E	d5toue_	All alpha proteins	Globin-like	Globin-like	Phycocyanin-like phycobilisome proteins	automated matches	(Pseudanabaena sp. lw0831 ) [TaxId: 1357935 ],	SCOPe (2.08)
G [auth I]	d5toui_	All alpha proteins	Globin-like	Globin-like	Phycocyanin-like phycobilisome proteins	automated matches	(Pseudanabaena sp. lw0831 ) [TaxId: 1357935 ],	SCOPe (2.08)
I [auth G]	d5toug_	All alpha proteins	Globin-like	Globin-like	Phycocyanin-like phycobilisome proteins	automated matches	(Pseudanabaena sp. lw0831 ) [TaxId: 1357935 ],	SCOPe (2.08)
K	d5touk_	All alpha proteins	Globin-like	Globin-like	Phycocyanin-like phycobilisome proteins	automated matches	(Pseudanabaena sp. lw0831 ) [TaxId: 1357935 ],	SCOPe (2.08)
B [auth D]	d5toud_	All alpha proteins	Globin-like	Globin-like	Phycocyanin-like phycobilisome proteins	automated matches	(Pseudanabaena sp. lw0831 ) [TaxId: 1357935 ],	SCOPe (2.08)
D [auth B]	d5toub_	All alpha proteins	Globin-like	Globin-like	Phycocyanin-like phycobilisome proteins	automated matches	(Pseudanabaena sp. lw0831 ) [TaxId: 1357935 ],	SCOPe (2.08)
F	d5touf_	All alpha proteins	Globin-like	Globin-like	Phycocyanin-like phycobilisome proteins	automated matches	(Pseudanabaena sp. lw0831 ) [TaxId: 1357935 ],	SCOPe (2.08)
H [auth J]	d5touj_	All alpha proteins	Globin-like	Globin-like	Phycocyanin-like phycobilisome proteins	automated matches	(Pseudanabaena sp. lw0831 ) [TaxId: 1357935 ],	SCOPe (2.08)
J [auth H]	d5touh_	All alpha proteins	Globin-like	Globin-like	Phycocyanin-like phycobilisome proteins	automated matches	(Pseudanabaena sp. lw0831 ) [TaxId: 1357935 ],	SCOPe (2.08)
L	d5toul_	All alpha proteins	Globin-like	Globin-like	Phycocyanin-like phycobilisome proteins	automated matches	(Pseudanabaena sp. lw0831 ) [TaxId: 1357935 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A [auth C]	SCOP2B Superfamily	Globin-like	8064896	3000554	SCOP2B (2022-06-29)
C [auth A]	SCOP2 Family	Phycocyanin-like phycobilisome proteins	8064895	4000579	SCOP2 (2022-06-29)
C [auth A]	SCOP2 Superfamily	Globin-like	8064896	3000554	SCOP2 (2022-06-29)
E	SCOP2B Superfamily	Globin-like	8064896	3000554	SCOP2B (2022-06-29)
G [auth I]	SCOP2B Superfamily	Globin-like	8064896	3000554	SCOP2B (2022-06-29)
I [auth G]	SCOP2B Superfamily	Globin-like	8064896	3000554	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Globin-like	8064896	3000554	SCOP2B (2022-06-29)
B [auth D]	SCOP2B Superfamily	Globin-like	8064832	3000554	SCOP2B (2022-06-29)
D [auth B]	SCOP2 Family	Phycocyanin-like phycobilisome proteins	8064831	4000579	SCOP2 (2022-06-29)
D [auth B]	SCOP2 Superfamily	Globin-like	8064832	3000554	SCOP2 (2022-06-29)
F	SCOP2B Superfamily	Globin-like	8064832	3000554	SCOP2B (2022-06-29)
H [auth J]	SCOP2B Superfamily	Globin-like	8064832	3000554	SCOP2B (2022-06-29)
J [auth H]	SCOP2B Superfamily	Globin-like	8064832	3000554	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Globin-like	8064832	3000554	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth C]	Phycobilisome	e5touC1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
C [auth A]	Phycobilisome	e5touA1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
E	Phycobilisome	e5touE1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
G [auth I]	Phycobilisome	e5touI1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
I [auth G]	Phycobilisome	e5touG1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
K	Phycobilisome	e5touK1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
B [auth D]	Phycobilisome	e5touD1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
D [auth B]	Phycobilisome	e5touB1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
F	Phycobilisome	e5touF1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
H [auth J]	Phycobilisome	e5touJ1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
J [auth H]	Phycobilisome	e5touH1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)
L	Phycobilisome	e5touL1	A: alpha arrays	X: Globin-like (From Topology)	H: Globin-like (From Topology)	T: Globin-like	F: Phycobilisome	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A [auth C]	1.10.490.20	Mainly Alpha	Orthogonal Bundle	Globin-like	Phycocyanins	CATH (4.3.0)
C [auth A]	1.10.490.20	Mainly Alpha	Orthogonal Bundle	Globin-like	Phycocyanins	CATH (4.3.0)
E	1.10.490.20	Mainly Alpha	Orthogonal Bundle	Globin-like	Phycocyanins	CATH (4.3.0)
G [auth I]	1.10.490.20	Mainly Alpha	Orthogonal Bundle	Globin-like	Phycocyanins	CATH (4.3.0)
I [auth G]	1.10.490.20	Mainly Alpha	Orthogonal Bundle	Globin-like	Phycocyanins	CATH (4.3.0)
K	1.10.490.20	Mainly Alpha	Orthogonal Bundle	Globin-like	Phycocyanins	CATH (4.3.0)
B [auth D]	1.10.490.20	Mainly Alpha	Orthogonal Bundle	Globin-like	Phycocyanins	CATH (4.3.0)
D [auth B]	1.10.490.20	Mainly Alpha	Orthogonal Bundle	Globin-like	Phycocyanins	CATH (4.3.0)
F	1.10.490.20	Mainly Alpha	Orthogonal Bundle	Globin-like	Phycocyanins	CATH (4.3.0)
H [auth J]	1.10.490.20	Mainly Alpha	Orthogonal Bundle	Globin-like	Phycocyanins	CATH (4.3.0)
J [auth H]	1.10.490.20	Mainly Alpha	Orthogonal Bundle	Globin-like	Phycocyanins	CATH (4.3.0)
L	1.10.490.20	Mainly Alpha	Orthogonal Bundle	Globin-like	Phycocyanins	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth C], C [auth A], E, G [auth I], I [auth G], A [auth C], C [auth A], E, G [auth I], I [auth G], K	PF00502	Phycobilisome protein (Phycobilisome)	Phycobilisome protein	-	Domain
B [auth D], D [auth B], F, H [auth J], J [auth H], B [auth D], D [auth B], F, H [auth J], J [auth H], L	PF00502	Phycobilisome protein (Phycobilisome)	Phycobilisome protein	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth C], C [auth A], E, G [auth I], I [auth G], A [auth C], C [auth A], E, G [auth I], I [auth G], K	Phycocyanin alpha-1 subunit	-	photosynthesis cellular metabolic process metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane plasma membrane-derived chromatophore cellular anatomical entity thylakoid membrane intracellular organelle cell periphery plasma membrane-derived thylakoid membrane organelle intracellular non-membrane-bounded organelle plasma membrane region bacterial thylakoid intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane plasma membrane-derived chromatophore cellular anatomical entity thylakoid membrane intracellular organelle cell periphery plasma membrane-derived thylakoid membrane organelle intracellular non-membrane-bounded organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid non-membrane-bounded organelle protein-containing complex membrane protein complex light-harvesting complex phycobilisome
B [auth D], D [auth B], F, H [auth J], J [auth H], B [auth D], D [auth B], F, H [auth J], J [auth H], L	Phycocyanin beta-1 subunit	-	photosynthesis cellular metabolic process metabolic process cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane plasma membrane-derived chromatophore cellular anatomical entity thylakoid membrane intracellular organelle cell periphery plasma membrane-derived thylakoid membrane organelle intracellular non-membrane-bounded organelle plasma membrane region bacterial thylakoid intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane plasma membrane-derived chromatophore cellular anatomical entity thylakoid membrane intracellular organelle cell periphery plasma membrane-derived thylakoid membrane organelle intracellular non-membrane-bounded organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid non-membrane-bounded organelle protein-containing complex membrane protein complex light-harvesting complex phycobilisome

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth C], C [auth A], E, G [auth I], I [auth G], A [auth C], C [auth A], E, G [auth I], I [auth G], K	IPR038719	Phycobilisome, alpha/beta subunit superfamily	Homologous Superfamily
A [auth C], C [auth A], E, G [auth I], I [auth G], A [auth C], C [auth A], E, G [auth I], I [auth G], K	IPR006246	Phycocyanin, alpha subunit	Family
A [auth C], C [auth A], E, G [auth I], I [auth G], A [auth C], C [auth A], E, G [auth I], I [auth G], K	IPR009050	Globin-like superfamily	Homologous Superfamily
A [auth C], C [auth A], E, G [auth I], I [auth G], A [auth C], C [auth A], E, G [auth I], I [auth G], K	IPR012128	Phycobilisome, alpha/beta subunit	Family
B [auth D], D [auth B], F, H [auth J], J [auth H], B [auth D], D [auth B], F, H [auth J], J [auth H], L	IPR038719	Phycobilisome, alpha/beta subunit superfamily	Homologous Superfamily
B [auth D], D [auth B], F, H [auth J], J [auth H], B [auth D], D [auth B], F, H [auth J], J [auth H], L	IPR006247	Phycocyanin, beta subunit	Family
B [auth D], D [auth B], F, H [auth J], J [auth H], B [auth D], D [auth B], F, H [auth J], J [auth H], L	IPR009050	Globin-like superfamily	Homologous Superfamily
B [auth D], D [auth B], F, H [auth J], J [auth H], B [auth D], D [auth B], F, H [auth J], J [auth H], L	IPR012128	Phycobilisome, alpha/beta subunit	Family

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
B [auth D], D [auth B], F, H [auth J], J [auth H], B [auth D], D [auth B], F, H [auth J], J [auth H], L	MEN	Parent Component: ASN RESID: AA0070 PSI-MOD : N4-methyl-L-asparagine MOD:00079

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.