Methicillin sensitive Staphylococcus aureus 70S ribosome
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| C [auth SC] | SCOP2 Family | Ribosomal protein S4 | 8083391 | 4001399 | SCOP2 (2022-06-29) |
| C [auth SC] | SCOP2 Superfamily | Alpha-L RNA-binding motif | 8083392 | 3001473 | SCOP2 (2022-06-29) |
| E [auth SE] | SCOP2 Family | Ribosomal protein S6 | 8066488 | 4001337 | SCOP2 (2022-06-29) |
| E [auth SE] | SCOP2 Superfamily | Ribosomal protein S6 | 8066489 | 3001323 | SCOP2 (2022-06-29) |
| F [auth SG] | SCOP2 Family | Ribosomal protein S7 | 8066030 | 4001112 | SCOP2 (2022-06-29) |
| F [auth SG] | SCOP2 Superfamily | Ribosomal protein S7 | 8066031 | 3000799 | SCOP2 (2022-06-29) |
| J [auth S2] | SCOP2B Superfamily | Translational machinery components | 8099268 | 3000571 | SCOP2B (2022-06-29) |
| K [auth S3] | SCOP2 Family | Cold shock DNA-binding domain-like | 8098335 | 4001909 | SCOP2 (2022-06-29) |
| K [auth S3] | SCOP2 Superfamily | Nucleic acid-binding proteins | 8098336 | 3000135 | SCOP2 (2022-06-29) |
| O [auth S7] | SCOP2 Family | Ribosomal protein S16 | 8066554 | 4001077 | SCOP2 (2022-06-29) |
| O [auth S7] | SCOP2 Superfamily | Ribosomal protein S16 | 8066555 | 3000680 | SCOP2 (2022-06-29) |
| P [auth S8] | SCOP2 Family | Cold shock DNA-binding domain-like | 8059271 | 4001909 | SCOP2 (2022-06-29) |
| P [auth S8] | SCOP2 Superfamily | Nucleic acid-binding proteins | 8059272 | 3000135 | SCOP2 (2022-06-29) |
| FA [auth LO] | SCOP2 Family | Ribosomal proteins L15p and L18e | 8070554 | 4003555 | SCOP2 (2022-06-29) |
| FA [auth LO] | SCOP2 Superfamily | Ribosomal proteins L15p and L18e | 8070555 | 3001045 | SCOP2 (2022-06-29) |
| JA [auth L1] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8082423 | 3000334 | SCOP2B (2022-06-29) |
| LA [auth L4] | SCOP2B Superfamily | l21p-like | 8094148 | 3002005 | SCOP2B (2022-06-29) |
| MA [auth L5] | SCOP2B Superfamily | Ribosomal protein L22 | 8076726 | 3001078 | SCOP2B (2022-06-29) |
| OA [auth L7] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8082503 | 3000334 | SCOP2B (2022-06-29) |
| QA [auth L9] | SCOP2B Superfamily | Ribosomal L27 protein-like | 8075030 | 3000539 | SCOP2B (2022-06-29) |
| XA [auth LH] | SCOP2B Superfamily | L35p-like | 8083334 | 3000790 | SCOP2B (2022-06-29) |
| YA [auth LI] | SCOP2B Superfamily | Ribosomal protein L36 | 8083312 | 3001346 | SCOP2B (2022-06-29) |
| I [auth S1] | SCOP2B Superfamily | Ribosomal protein S10 | 8099360 | 3001336 | SCOP2B (2022-06-29) |
| H [auth SH] | SCOP2 Family | Translational machinery components | 8082668 | 4000951 | SCOP2 (2022-06-29) |
| H [auth SH] | SCOP2 Superfamily | Ribosomal protein S5 domain 2-like | 8082669 | 3000100 | SCOP2 (2022-06-29) |
| G [auth SF] | SCOP2 Family | Ribosomal protein S8 | 8079048 | 4002027 | SCOP2 (2022-06-29) |
| G [auth SF] | SCOP2 Superfamily | Ribosomal protein S8 | 8079049 | 3000709 | SCOP2 (2022-06-29) |
| ZA [auth LF] | SCOP2 Family | Ribosomal protein L31p | 8086137 | 4003966 | SCOP2 (2022-06-29) |
| ZA [auth LF] | SCOP2 Superfamily | L28p-like | 8086138 | 3001966 | SCOP2 (2022-06-29) |
| VA [auth LS] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8099282 | 3001320 | SCOP2B (2022-06-29) |
| TA [auth LD] | SCOP2B Superfamily | Ribosomal protein L30p/L7e | 8076281 | 3001378 | SCOP2B (2022-06-29) |
| SA [auth LB] | SCOP2B Superfamily | Ribosomal protein L29 (L29p) | 8094170 | 3000713 | SCOP2B (2022-06-29) |
| NA [auth L6] | SCOP2B Superfamily | Ribosomal proteins S24e, L23 and L15e | 8086046 | 3000210 | SCOP2B (2022-06-29) |
| KA [auth L3] | SCOP2B Superfamily | Ribosomal protein L20 | 8094941 | 3000563 | SCOP2B (2022-06-29) |
| HA [auth LQ] | SCOP2B Superfamily | Prokaryotic ribosomal protein L17 | 8089022 | 3000995 | SCOP2B (2022-06-29) |
| GA [auth LP] | SCOP2B Superfamily | Ribosomal protein L16p/L10e | 8076041 | 3000884 | SCOP2B (2022-06-29) |
| EA [auth LN] | SCOP2B Superfamily | 50S Ribosomal protein L14-like | 8093892 | 3000433 | SCOP2B (2022-06-29) |
| DA [auth LM] | SCOP2B Superfamily | Ribosomal protein L13 | 8066059 | 3001134 | SCOP2B (2022-06-29) |
| AA [auth LJ] | SCOP2B Superfamily | Ribosomal protein L4 | 8094174 | 3001146 | SCOP2B (2022-06-29) |
| Z [auth LC] | SCOP2B Superfamily | Translational proteins | 8089152 | 3000811 | SCOP2B (2022-06-29) |
| R [auth SI] | SCOP2 Family | Ribosomal protein S19 | 8086063 | 4001081 | SCOP2 (2022-06-29) |
| R [auth SI] | SCOP2 Superfamily | Ribosomal protein S19 | 8086064 | 3000686 | SCOP2 (2022-06-29) |
| N [auth S6] | SCOP2 Family | 30S Ribosomal protein S15 / 40S Ribosomal protein S13 | 8072620 | 4000767 | SCOP2 (2022-06-29) |
| N [auth S6] | SCOP2 Superfamily | S15/NS1 RNA-binding domain | 8072621 | 3001284 | SCOP2 (2022-06-29) |
| L [auth S4] | SCOP2B Superfamily | S13-like H2TH domain | 8099266 | 3000053 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C [auth SC] | S4 | e5tcuSC1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Alpha-L RNA-binding motif | F: S4 | ECOD (1.6) |
| E [auth SE] | Ribosomal_S6 | e5tcuSE1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein S6 (From Topology) | T: Ribosomal protein S6 | F: Ribosomal_S6 | ECOD (1.6) |
| F [auth SG] | Ribosomal_S7_1 | e5tcuSG1 | A: alpha arrays | X: Ribosomal protein S7 (From Topology) | H: Ribosomal protein S7 (From Topology) | T: Ribosomal protein S7 | F: Ribosomal_S7_1 | ECOD (1.6) |
| J [auth S2] | Ribosomal_S11 | e5tcuS21 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Ribosomal_S11 | ECOD (1.6) |
| K [auth S3] | Ribosom_S12_S23 | e5tcuS31 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Ribosom_S12_S23 | ECOD (1.6) |
| M [auth S5] | Ribosomal_S14 | e5tcuS51 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: Ribosomal_S14 | ECOD (1.6) |
| O [auth S7] | Ribosomal_S16_1 | e5tcuS71 | A: a+b two layers | X: Ribosomal protein S16 (From Topology) | H: Ribosomal protein S16 (From Topology) | T: Ribosomal protein S16 | F: Ribosomal_S16_1 | ECOD (1.6) |
| P [auth S8] | Ribosomal_S17_1 | e5tcuS81 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Ribosomal_S17_1 | ECOD (1.6) |
| CA [auth LL] | Ribosomal_L6 | e5tcuLL1 | A: a+b two layers | X: Ribosomal protein L6 (From Topology) | H: Ribosomal protein L6 (From Topology) | T: Ribosomal protein L6 | F: Ribosomal_L6 | ECOD (1.6) |
| CA [auth LL] | Ribosomal_L6_1 | e5tcuLL2 | A: a+b two layers | X: Ribosomal protein L6 (From Topology) | H: Ribosomal protein L6 (From Topology) | T: Ribosomal protein L6 | F: Ribosomal_L6_1 | ECOD (1.6) |
| FA [auth LO] | Ribosomal_L27A | e5tcuLO1 | A: a/b three-layered sandwiches | X: Ribosomal protein L13/L15p/L18e/L32e | H: Ribosomal proteins L15p and L18e (From Topology) | T: Ribosomal proteins L15p and L18e | F: Ribosomal_L27A | ECOD (1.6) |
| IA [auth LR] | Ribosomal_L18p | e5tcuLR1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Ribosomal_L18p | ECOD (1.6) |
| JA [auth L1] | Ribosomal_L19 | e5tcuL11 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Ribosomal_L19 | ECOD (1.6) |
| LA [auth L4] | Ribosomal_L21p | e5tcuL41 | A: beta barrels | X: Ribosomal protein L21p (From Topology) | H: Ribosomal protein L21p (From Topology) | T: Ribosomal protein L21p | F: Ribosomal_L21p | ECOD (1.6) |
| MA [auth L5] | Ribosomal_L22 | e5tcuL51 | A: a+b two layers | X: Enolase-N/ribosomal protein | H: Ribosomal protein L22 (From Topology) | T: Ribosomal protein L22 | F: Ribosomal_L22 | ECOD (1.6) |
| OA [auth L7] | ribosomal_L24_1 | e5tcuL71 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: ribosomal_L24_1 | ECOD (1.6) |
| QA [auth L9] | Ribosomal_L27 | e5tcuL91 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Ribosomal L27 protein | F: Ribosomal_L27 | ECOD (1.6) |
| WA [auth LG] | Ribosomal_L34 | e5tcuLG1 | A: extended segments | X: 50S ribosomal protein L34 (From Topology) | H: 50S ribosomal protein L34 (From Topology) | T: 50S ribosomal protein L34 | F: Ribosomal_L34 | ECOD (1.6) |
| XA [auth LH] | Ribosomal_L35p | e5tcuLH1 | A: a+b two layers | X: Ribosomal protein L35p (From Topology) | H: Ribosomal protein L35p (From Topology) | T: Ribosomal protein L35p | F: Ribosomal_L35p | ECOD (1.6) |
| YA [auth LI] | Ribosomal_L36 | e5tcuLI1 | A: few secondary structure elements | X: Ribosomal protein L36 (From Topology) | H: Ribosomal protein L36 (From Topology) | T: Ribosomal protein L36 | F: Ribosomal_L36 | ECOD (1.6) |
| I [auth S1] | Ribosomal_S10 | e5tcuS11 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein S10 (From Topology) | T: Ribosomal protein S10 | F: Ribosomal_S10 | ECOD (1.6) |
| H [auth SH] | Ribosomal_S9 | e5tcuSH1 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: Ribosomal_S9 | ECOD (1.6) |
| G [auth SF] | Ribosomal_S8_N | e5tcuSF1 | A: a+b two layers | X: R3H domain-like | H: Ribosomal protein S8, N-terminal domain (From Topology) | T: Ribosomal protein S8, N-terminal domain | F: Ribosomal_S8_N | ECOD (1.6) |
| G [auth SF] | Ribosomal_S8_C | e5tcuSF2 | A: a+b two layers | X: Ribosomal protein S8, C-terminal domain (From Topology) | H: Ribosomal protein S8, C-terminal domain (From Topology) | T: Ribosomal protein S8, C-terminal domain | F: Ribosomal_S8_C | ECOD (1.6) |
| ZA [auth LF] | Ribosomal_L31 | e5tcuLF1 | A: few secondary structure elements | X: Ribosomal protein L31p (From Topology) | H: Ribosomal protein L31p (From Topology) | T: Ribosomal protein L31p | F: Ribosomal_L31 | ECOD (1.6) |
| VA [auth LS] | Ribosomal_L33 | e5tcuLS1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: Ribosomal_L33 | ECOD (1.6) |
| UA [auth LE] | Ribosomal_L32p | e5tcuLE1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: Ribosomal_L32p | ECOD (1.6) |
| TA [auth LD] | Ribosomal_L30 | e5tcuLD1 | A: a+b two layers | X: Ribosomal protein L30p/L7e (From Topology) | H: Ribosomal protein L30p/L7e (From Topology) | T: Ribosomal protein L30p/L7e | F: Ribosomal_L30 | ECOD (1.6) |
| SA [auth LB] | Ribosomal_L29 | e5tcuLB1 | A: alpha bundles | X: Long alpha-hairpin | H: Ribosomal protein L29 (L29p) (From Topology) | T: Ribosomal protein L29 (L29p) | F: Ribosomal_L29 | ECOD (1.6) |
| RA [auth LA] | Ribosomal_L28 | e5tcuLA1 | A: few secondary structure elements | X: Ribosomal protein bL28-related (From Homology) | H: Ribosomal protein bL28-related | T: Ribosomal protein L28 | F: Ribosomal_L28 | ECOD (1.6) |
| PA [auth L8] | Ribosomal_L25p | e5tcuL81 | A: beta barrels | X: Ribosomal protein L25-like | H: Ribosomal protein L25-like (From Topology) | T: Ribosomal protein L25-like | F: Ribosomal_L25p | ECOD (1.6) |
| NA [auth L6] | Ribosomal_L23_2 | e5tcuL61 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal proteins S24e, L23 and L15e (From Topology) | T: Ribosomal proteins S24e, L23 and L15e | F: Ribosomal_L23_2 | ECOD (1.6) |
| D [auth SD] | Ribosomal_S5_C | e5tcuSD2 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: Ribosomal_S5_C | ECOD (1.6) |
| D [auth SD] | Ribosomal_S5 | e5tcuSD1 | A: a+b two layers | X: dsRBD-like | H: dsRNA-binding domain-like (From Topology) | T: dsRNA-binding domain-like | F: Ribosomal_S5 | ECOD (1.6) |
| KA [auth L3] | Ribosomal_L20 | e5tcuL31 | A: alpha arrays | X: PABP domain-like | H: Ribosomal protein L20 (From Topology) | T: Ribosomal protein L20 | F: Ribosomal_L20 | ECOD (1.6) |
| HA [auth LQ] | Ribosomal_L17_1 | e5tcuLQ1 | A: a+b two layers | X: Enolase-N/ribosomal protein | H: Prokaryotic ribosomal protein L17 (From Topology) | T: Prokaryotic ribosomal protein L17 | F: Ribosomal_L17_1 | ECOD (1.6) |
| GA [auth LP] | Ribosomal_L16 | e5tcuLP1 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Ribosomal protein L10e | F: Ribosomal_L16 | ECOD (1.6) |
| EA [auth LN] | Ribosomal_L14 | e5tcuLN1 | A: beta barrels | X: Ribosomal protein L14-like | H: Ribosomal protein L14-related (From Topology) | T: Ribosomal protein L14-related | F: Ribosomal_L14 | ECOD (1.6) |
| DA [auth LM] | Ribosomal_L13 | e5tcuLM1 | A: a/b three-layered sandwiches | X: Ribosomal protein L13/L15p/L18e/L32e | H: Ribosomal protein L13 and L16-A (From Topology) | T: Ribosomal protein L13 and L16-A | F: Ribosomal_L13 | ECOD (1.6) |
| BA [auth LK] | Ribosomal_L5_C | e5tcuLK1 | A: a+b two layers | X: Ribosomal protein L5 (From Topology) | H: Ribosomal protein L5 (From Topology) | T: Ribosomal protein L5 | F: Ribosomal_L5_C | ECOD (1.6) |
| AA [auth LJ] | Ribosomal_L4 | e5tcuLJ1 | A: a/b three-layered sandwiches | X: Ribosomal protein L4 (From Topology) | H: Ribosomal protein L4 (From Topology) | T: Ribosomal protein L4 | F: Ribosomal_L4 | ECOD (1.6) |
| Z [auth LC] | Ribosomal_L3 | e5tcuLC1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: Ribosomal_L3 | ECOD (1.6) |
| Y [auth L2] | Ribosomal_L2_1 | e5tcuL22 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Ribosomal_L2_1 | ECOD (1.6) |
| Y [auth L2] | Ribosomal_L2_C | e5tcuL21 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Ribosomal_L2_C | ECOD (1.6) |
| B [auth SB] | Ribosomal_S3_C | e5tcuSB2 | A: a+b two layers | X: T-fold | H: Ribosomal protein S3-C (From Topology) | T: Ribosomal protein S3-C | F: Ribosomal_S3_C | ECOD (1.6) |
| B [auth SB] | KH_2_1 | e5tcuSB1 | A: a+b two layers | X: Alpha-lytic protease prodomain-like | H: KH-domains | T: Prokaryotic type KH domain (KH-domain type II) | F: KH_2_1 | ECOD (1.6) |
| S [auth SA] | Ribosomal_S20p | e5tcuSA1 | A: alpha bundles | X: Spectrin repeat-like | H: Ribosomal protein S20 (From Topology) | T: Ribosomal protein S20 | F: Ribosomal_S20p | ECOD (1.6) |
| R [auth SI] | Ribosomal_S19 | e5tcuSI1 | A: a+b two layers | X: Ribosomal protein S19 (From Topology) | H: Ribosomal protein S19 (From Topology) | T: Ribosomal protein S19 | F: Ribosomal_S19 | ECOD (1.6) |
| Q [auth S9] | Ribosomal_S18 | e5tcuS91 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: Ribosomal_S18 | ECOD (1.6) |
| N [auth S6] | Ribosomal_S15_1 | e5tcuS61 | A: alpha arrays | X: S15/NS1 RNA-binding domain (From Topology) | H: S15/NS1 RNA-binding domain (From Topology) | T: S15/NS1 RNA-binding domain | F: Ribosomal_S15_1 | ECOD (1.6) |
| L [auth S4] | Ribosomal_S13_1 | e5tcuS41 | A: alpha arrays | X: HhH/H2TH | H: H2TH (From Topology) | T: H2TH | F: Ribosomal_S13_1 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| C [auth SC] | PF00163 | Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4) | Ribosomal protein S4/S9 N-terminal domain | - | Family |
| C [auth SC] | PF01479 | S4 domain (S4) | S4 domain | The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ... | Domain |
| E [auth SE] | PF01250 | Ribosomal protein S6 (Ribosomal_S6) | Ribosomal protein S6 | Domain | |
| F [auth SG] | PF00177 | Ribosomal protein S7p/S5e (Ribosomal_S7) | Ribosomal protein S7p/S5e | This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. | Domain |
| J [auth S2] | PF00411 | Ribosomal protein S11 (Ribosomal_S11) | Ribosomal protein S11 | - | Family |
| K [auth S3] | PF00164 | Ribosomal protein S12/S23 (Ribosom_S12_S23) | Ribosomal protein S12/S23 | This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. | Domain |
| M [auth S5] | PF00253 | Ribosomal protein S14p/S29e (Ribosomal_S14) | Ribosomal protein S14p/S29e | - | Family |
| O [auth S7] | PF00886 | Ribosomal protein S16 (Ribosomal_S16) | Ribosomal protein S16 | - | Family |
| P [auth S8] | PF00366 | Ribosomal protein S17 (Ribosomal_S17) | Ribosomal protein S17 | Domain | |
| CA [auth LL] | PF00347 | Ribosomal protein L6 (Ribosomal_L6) | Ribosomal protein L6 | Domain | |
| FA [auth LO] | PF00828 | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A) | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A | This family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. | Domain |
| IA [auth LR] | PF00861 | Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p) | Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast | - | Family |
| JA [auth L1] | PF01245 | Ribosomal protein L19 (Ribosomal_L19) | Ribosomal protein L19 | - | Family |
| LA [auth L4] | PF00829 | Ribosomal prokaryotic L21 protein (Ribosomal_L21p) | Ribosomal prokaryotic L21 protein | - | Family |
| MA [auth L5] | PF00237 | Ribosomal protein L22p/L17e (Ribosomal_L22) | Ribosomal protein L22p/L17e | This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. | Domain |
| OA [auth L7] | PF17136 | Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24) | Large ribosomal subunit protein uL24, C-terminal domain | This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ... | Domain |
| OA [auth L7] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |
| QA [auth L9] | PF01016 | Ribosomal L27 protein (Ribosomal_L27) | Ribosomal L27 protein | - | Family |
| WA [auth LG] | PF00468 | Ribosomal protein L34 (Ribosomal_L34) | Ribosomal protein L34 | - | Family |
| XA [auth LH] | PF01632 | Ribosomal protein L35 (Ribosomal_L35p) | Ribosomal protein L35 | - | Family |
| YA [auth LI] | PF00444 | Ribosomal protein L36 (Ribosomal_L36) | Ribosomal protein L36 | Domain | |
| I [auth S1] | PF00338 | Ribosomal protein S10p/S20e (Ribosomal_S10) | Ribosomal protein S10p/S20e | This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. | Domain |
| H [auth SH] | PF00380 | Ribosomal protein S9/S16 (Ribosomal_S9) | Ribosomal protein S9/S16 | - | Family |
| G [auth SF] | PF00410 | Ribosomal protein S8 (Ribosomal_S8) | Ribosomal protein S8 | Domain | |
| ZA [auth LF] | PF01197 | Ribosomal protein L31 (Ribosomal_L31) | Ribosomal protein L31 | - | Family |
| VA [auth LS] | PF00471 | Ribosomal protein L33 (Ribosomal_L33) | Ribosomal protein L33 | - | Family |
| UA [auth LE] | PF01783 | Ribosomal L32p protein family (Ribosomal_L32p) | Ribosomal L32p protein family | - | Family |
| TA [auth LD] | PF00327 | Ribosomal protein L30p/L7e (Ribosomal_L30) | Ribosomal protein L30p/L7e | This family includes prokaryotic L30 and eukaryotic L7. | Domain |
| SA [auth LB] | PF00831 | Ribosomal L29 protein (Ribosomal_L29) | Ribosomal L29 protein | - | Family |
| RA [auth LA] | PF00830 | Ribosomal L28 family (Ribosomal_L28) | Ribosomal L28 family | - | Family |
| PA [auth L8] | PF01386 | Ribosomal L25p family (Ribosomal_L25p) | Ribosomal L25p family | Ribosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress. | Domain |
| NA [auth L6] | PF00276 | Ribosomal protein L23 (Ribosomal_L23) | Ribosomal protein L23 | - | Family |
| D [auth SD] | PF03719 | Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C) | Ribosomal protein S5, C-terminal domain | Domain | |
| D [auth SD] | PF00333 | Ribosomal protein S5, N-terminal domain (Ribosomal_S5) | Ribosomal protein S5, N-terminal domain | Domain | |
| KA [auth L3] | PF00453 | Ribosomal protein L20 (Ribosomal_L20) | Ribosomal protein L20 | - | Family |
| HA [auth LQ] | PF01196 | Ribosomal protein L17 (Ribosomal_L17) | Ribosomal protein L17 | - | Family |
| GA [auth LP] | PF00252 | Ribosomal protein L16p/L10e (Ribosomal_L16) | Ribosomal protein L16p/L10e | Domain | |
| EA [auth LN] | PF00238 | Ribosomal protein L14p/L23e (Ribosomal_L14) | Ribosomal protein L14p/L23e | Domain | |
| DA [auth LM] | PF00572 | Ribosomal protein L13 (Ribosomal_L13) | Ribosomal protein L13 | - | Family |
| BA [auth LK] | PF00281 | Ribosomal protein L5 (Ribosomal_L5) | Ribosomal protein L5 | Domain | |
| BA [auth LK] | PF00673 | ribosomal L5P family C-terminus (Ribosomal_L5_C) | ribosomal L5P family C-terminus | This region is found associated with Pfam:PF00281. | Domain |
| AA [auth LJ] | PF00573 | Ribosomal protein L4/L1 family (Ribosomal_L4) | Ribosomal protein L4/L1 family | - | Family |
| Z [auth LC] | PF00297 | Ribosomal protein L3 (Ribosomal_L3) | Ribosomal protein L3 | - | Family |
| Y [auth L2] | PF03947 | Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C) | Ribosomal Proteins L2, C-terminal domain | Domain | |
| Y [auth L2] | PF00181 | Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N) | Ribosomal Proteins L2, RNA binding N-terminal domain | Domain | |
| B [auth SB] | PF07650 | KH domain (KH_2) | KH domain | Domain | |
| B [auth SB] | PF00189 | Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C) | Ribosomal protein S3, C-terminal domain | This family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. | Domain |
| S [auth SA] | PF01649 | Ribosomal protein S20 (Ribosomal_S20p) | Ribosomal protein S20 | - | Family |
| R [auth SI] | PF00203 | Ribosomal protein S19 (Ribosomal_S19) | Ribosomal protein S19 | Domain | |
| Q [auth S9] | PF01084 | Ribosomal protein S18 (Ribosomal_S18) | Ribosomal protein S18 | - | Family |
| N [auth S6] | PF00312 | Ribosomal protein S15 (Ribosomal_S15) | Ribosomal protein S15 | Domain | |
| L [auth S4] | PF00416 | Ribosomal protein S13/S18 (Ribosomal_S13) | Ribosomal protein S13/S18 | - | Family |














