5TAO | pdb_00005tao

Haloferax volcanii Malate Synthase Lead(II) complex

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	HpcH_HpaI	e5taoA1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: HpcH_HpaI	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.20.20.60	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Phosphoenolpyruvate-binding domains	CATH (4.2.0)
A	1.20.58.1560	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.2.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF25918	Malate synthase H C-terminal domain (MSH_C)	Malate synthase H C-terminal domain	This entry represents the C-terminal domain of malate synthase H isoform found in halophilic archaea. Malate synthase is an enzyme involved in the glyoxylate cycle, catalyzing the condensation of acetyl-CoA with glyoxylate to form malate. The C-termi ...	This entry represents the C-terminal domain of malate synthase H isoform found in halophilic archaea. Malate synthase is an enzyme involved in the glyoxylate cycle, catalyzing the condensation of acetyl-CoA with glyoxylate to form malate. The C-terminal domain caps the active site of the protein and contributes the catalytic base. This domain is smaller than the corresponding domains in malate synthase isoforms A and G. The MSH isoform lacks an N-terminal domain present in other isoforms and forms trimeric or hexameric assemblies, unlike the monomeric A and G isoforms.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Malate synthase	cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding acyltransferase activity acyltransferase activity, acyl groups converted into alkyl on transfer transferase activity malate synthase activity catalytic activity	aerobic respiration cellular respiration tricarboxylic acid cycle energy derivation by oxidation of organic compounds primary metabolic process metabolic process cellular process generation of precursor metabolites and energy carbohydrate metabolic process glyoxylate metabolic process glyoxylate cycle oxoacid metabolic process carboxylic acid metabolic process organic acid metabolic process aerobic respiration cellular respiration tricarboxylic acid cycle energy derivation by oxidation of organic compounds primary metabolic process metabolic process cellular process generation of precursor metabolites and energy carbohydrate metabolic process glyoxylate metabolic process glyoxylate cycle oxoacid metabolic process carboxylic acid metabolic process organic acid metabolic process aldehyde metabolic process small molecule metabolic process monocarboxylic acid metabolic process dicarboxylic acid metabolic process oxaloacetate metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR015813	Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily	Homologous Superfamily
A	IPR040442	Pyruvate kinase-like domain superfamily	Homologous Superfamily
A	IPR053484	Malate Synthase	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.