5T87

Crystal structure of CDI complex from Cupriavidus taiwanensis LMG 19424

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	F_UNCLASSIFIED	e5t87A1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: F_UNCLASSIFIED	ECOD (1.6)
B	F_UNCLASSIFIED	e5t87B1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: F_UNCLASSIFIED	ECOD (1.6)
C	F_UNCLASSIFIED	e5t87C1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: F_UNCLASSIFIED	ECOD (1.6)
D	F_UNCLASSIFIED	e5t87D1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: F_UNCLASSIFIED	ECOD (1.6)
E	F_UNCLASSIFIED	e5t87E1	A: a+b two layers	X: C-terminal domain of CdiA toxin	H: C-terminal domain of Cupriavidus CdiA toxin (From Topology)	T: C-terminal domain of Cupriavidus CdiA toxin	F: F_UNCLASSIFIED	ECOD (1.6)
F	F_UNCLASSIFIED	e5t87F1	A: a+b two layers	X: C-terminal domain of CdiA toxin	H: C-terminal domain of Cupriavidus CdiA toxin (From Topology)	T: C-terminal domain of Cupriavidus CdiA toxin	F: F_UNCLASSIFIED	ECOD (1.6)
G	F_UNCLASSIFIED	e5t87G1	A: a+b two layers	X: C-terminal domain of CdiA toxin	H: C-terminal domain of Cupriavidus CdiA toxin (From Topology)	T: C-terminal domain of Cupriavidus CdiA toxin	F: F_UNCLASSIFIED	ECOD (1.6)
H	F_UNCLASSIFIED	e5t87H1	A: a+b two layers	X: C-terminal domain of CdiA toxin	H: C-terminal domain of Cupriavidus CdiA toxin (From Topology)	T: C-terminal domain of Cupriavidus CdiA toxin	F: F_UNCLASSIFIED	ECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	CdiI immunity protein	-	-	-
E, F, G, H	CdiA toxin	catalytic activity toxin activity	-	intracellular anatomical structure cytoplasm cellular anatomical entity

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR049796	CdiI immunity protein-like	Family
E, F, G, H	IPR008638	Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain	Domain
E, F, G, H	IPR012334	Pectin lyase fold	Homologous Superfamily
E, F, G, H	IPR006914	VENN motif-containing domain	Domain
E, F, G, H	IPR024973	ESPR domain	Domain
E, F, G, H	IPR025157	Hemagglutinin repeat	Repeat
E, F, G, H	IPR010069	Toxin CdiA-like, Filamentous hemagglutinin motif repeats	Repeat
E, F, G, H	IPR011050	Pectin lyase fold/virulence factor	Homologous Superfamily

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.