5T59 | pdb_00005t59

Structure of the MIND Complex Shows a Regulatory Focus of Yeast Kinetochore Assembly

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
E	SCOP2B Superfamily	Nnf1/Mis12 N-terminal domain-like	8090066	3002415	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Nnf1/Mis12 N-terminal domain-like	8090066	3002415	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Nnf1/Mis12 N-terminal domain-like	8090069	3002415	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Nnf1/Mis12 N-terminal domain-like	8090069	3002415	SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B, E	PF03980	Nnf1 (Nnf1)	Nnf1	-	Family
A, D	PF05859	Mis12 protein (Mis12)	Mis12 protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C, F	KLLA0B13629p	DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding double-stranded DNA binding binding centromeric DNA binding nucleic acid binding	meiotic chromosome segregation sexual reproduction reproductive process attachment of meiotic spindle microtubules to kinetochore meiotic cell cycle process metaphase chromosome alignment cellular component organization localization meiotic metaphase I homologous chromosome alignment meiosis I chromosome localization organelle localization meiotic nuclear division cell cycle meiotic chromosome segregation sexual reproduction reproductive process attachment of meiotic spindle microtubules to kinetochore meiotic cell cycle process metaphase chromosome alignment cellular component organization localization meiotic metaphase I homologous chromosome alignment meiosis I chromosome localization organelle localization meiotic nuclear division cell cycle cellular component organization or biogenesis chromosome segregation cell cycle process attachment of spindle microtubules to kinetochore meiotic cell cycle organelle fission spindle attachment to meiosis I kinetochore nuclear division organelle organization meiosis I cell cycle process nuclear chromosome segregation meiotic metaphase chromosome alignment cellular process homologous chromosome segregation organelle assembly protein-containing complex organization chromosome organization membraneless organelle assembly cellular component biogenesis cellular component assembly kinetochore assembly protein-containing complex assembly kinetochore organization mitotic metaphase chromosome alignment mitotic cell cycle mitotic sister chromatid segregation mitotic nuclear division attachment of mitotic spindle microtubules to kinetochore sister chromatid segregation mitotic cell cycle process	intracellular anatomical structure intracellular membraneless organelle chromosome chromosomal region kinetochore intracellular organelle cellular anatomical structure organelle membraneless organelle chromosome, centromeric region condensed chromosome, centromeric region supramolecular complex condensed chromosome membrane-bounded organelle intracellular anatomical structure intracellular membraneless organelle chromosome chromosomal region kinetochore intracellular organelle cellular anatomical structure organelle membraneless organelle chromosome, centromeric region condensed chromosome, centromeric region supramolecular complex condensed chromosome membrane-bounded organelle nucleus intracellular membrane-bounded organelle
B, E	KLLA0E05809p	-	cellular process cell division cell cycle chromosome segregation cell cycle process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle MIS12/MIND type complex chromosome chromosomal region kinetochore intracellular organelle cellular anatomical structure organelle membraneless organelle chromosome, centromeric region outer kinetochore condensed chromosome, centromeric region protein-containing complex intracellular anatomical structure intracellular membraneless organelle MIS12/MIND type complex chromosome chromosomal region kinetochore intracellular organelle cellular anatomical structure organelle membraneless organelle chromosome, centromeric region outer kinetochore condensed chromosome, centromeric region supramolecular complex condensed chromosome membrane-bounded organelle nucleus intracellular membrane-bounded organelle
A, D	KLLA0F02343p	-	mitotic nuclear division organelle fission chromosome organization sister chromatid segregation mitotic cell cycle cellular component organization organelle organization nuclear division mitotic cell cycle process mitotic sister chromatid segregation nuclear chromosome segregation cellular process cellular component organization or biogenesis cell cycle mitotic nuclear division organelle fission chromosome organization sister chromatid segregation mitotic cell cycle cellular component organization organelle organization nuclear division mitotic cell cycle process mitotic sister chromatid segregation nuclear chromosome segregation cellular process cellular component organization or biogenesis cell cycle chromosome segregation cell cycle process organelle assembly protein-containing complex organization membraneless organelle assembly cellular component biogenesis cellular component assembly kinetochore assembly protein-containing complex assembly kinetochore organization cell division	protein-containing complex intracellular anatomical structure intracellular membraneless organelle MIS12/MIND type complex chromosome chromosomal region kinetochore intracellular organelle cellular anatomical structure organelle membraneless organelle chromosome, centromeric region outer kinetochore condensed chromosome, centromeric region protein-containing complex intracellular anatomical structure intracellular membraneless organelle MIS12/MIND type complex chromosome chromosomal region kinetochore intracellular organelle cellular anatomical structure organelle membraneless organelle chromosome, centromeric region outer kinetochore condensed chromosome, centromeric region supramolecular complex condensed chromosome membrane-bounded organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C, F	IPR011051	RmlC-like cupin domain superfamily	Homologous Superfamily
C, F	IPR025974	Mif2/CENP-C cupin domain	Domain
C, F	IPR028929	Mif2, N-terminal	Domain
C, F	IPR028386	Centromere protein C/Mif2/cnp3	Family
C, F	IPR014710	RmlC-like jelly roll fold	Homologous Superfamily
B, E	IPR016851	Kinetochore-associated protein Nnf1	Family
B, E	IPR007128	Nuclear MIS12/MIND complex subunit PMF1/Nnf1	Family
A, D	IPR008685	Centromere protein Mis12	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.