Annotations: 5OYN

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	SBP_bac_1	e5oynD1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: SBP_bac_1	ECOD (v294.1)
C	SBP_bac_1	e5oynC1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: SBP_bac_1	ECOD (v294.1)
B	SBP_bac_1	e5oynB1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: SBP_bac_1	ECOD (v294.1)
A	Gal-bind_lectin	e5oynA1	A: a/b three-layered sandwiches	X: Protein kinase/SAICAR synthase/ATP-grasp	H: Protein kinase/SAICAR synthase/ATP-grasp	T: Protein kinase	F: Gal-bind_lectin	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.50.30.80	Alpha Beta	3-Layer(bba) Sandwich	Glucose Oxidase	domain 1	CATH (utative)
C	3.50.30.80	Alpha Beta	3-Layer(bba) Sandwich	Glucose Oxidase	domain 1	CATH (utative)
B	3.50.30.80	Alpha Beta	3-Layer(bba) Sandwich	Glucose Oxidase	domain 1	CATH (utative)
A	3.50.30.80	Alpha Beta	3-Layer(bba) Sandwich	Glucose Oxidase	domain 1	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF00920	Dihydroxy-acid/6-phosphogluconate dehydratase N-terminal (ILVD_EDD_N)	Dihydroxy-acid/6-phosphogluconate dehydratase N-terminal	This is the N-terminal domain of Ilv/ED dehydratase protein family which includes dihydroxy-acid/6-phosphogluconate dehydratases, and pentonate dehydratases [3]. Members of this entry are involved in various biosynthetic and carbohydrate metabolic pa ...	This is the N-terminal domain of Ilv/ED dehydratase protein family which includes dihydroxy-acid/6-phosphogluconate dehydratases, and pentonate dehydratases [3]. Members of this entry are involved in various biosynthetic and carbohydrate metabolic pathways [2]. Dihydroxy-acid dehydratase catalyses the fourth step in the biosynthesis of isoleucine and valine, the dehydration of 2,3-dihydroxy-isovaleic acid into alpha-ketoisovaleric acid. 6-Phosphogluconate dehydratase catalyses the first step in the Entner-Doudoroff pathway, the dehydration of 6-phospho-D-gluconate into 6-phospho-2-dehydro-3-deoxy-D-gluconate. They consist of two domains, N- and C-terminal. This domain is composed of a beta-sheet with four parallel beta-strands surrounded by four alpha-helices and forms a binding site for a [2Fe-2S] cluster and a Mg2+ ion [1,2].	Domain
A, B, C, D	PF24877	Dihydroxy-acid/6-phosphogluconate dehydratase C-terminal (ILV_EDD_C)	Dihydroxy-acid/6-phosphogluconate dehydratase C-terminal	This is the C-terminal domain of Ilv/ED dehydratase protein family which includes dihydroxy-acid/6-phosphogluconate dehydratases, and pentonate dehydratases [1]. Members of this entry are involved in various biosynthetic and carbohydrate metabolic p ...	This is the C-terminal domain of Ilv/ED dehydratase protein family which includes dihydroxy-acid/6-phosphogluconate dehydratases, and pentonate dehydratases [1]. Members of this entry are involved in various biosynthetic and carbohydrate metabolic pathways [2]. Dihydroxy-acid dehydratase catalyses the fourth step in the biosynthesis of isoleucine and valine, the dehydration of 2,3-dihydroxy-isovaleic acid into alpha-ketoisovaleric acid. 6-Phosphogluconate dehydratase catalyses the first step in the Entner-Doudoroff pathway, the dehydration of 6-phospho-D-gluconate into 6-phospho-2-dehydro-3-deoxy-D-gluconate. They consist of two domains, N- and C-terminal, the latter contains residues (Ser490 and Thr492) that participate in the formation of the substrate binding site. This domain is composed of a beta-sheet consisting of six parallel and two anti-parallel beta-strands that are arranged like a beta-barrel [2,3].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Dehydratase, IlvD/Edd family	hydro-lyase activity lyase activity catalytic activity carbon-oxygen lyase activity gluconate dehydratase activity iron-sulfur cluster binding 2 iron, 2 sulfur cluster binding binding metal cluster binding small molecule binding cation binding ion binding metal ion binding xylonate dehydratase activity	monosaccharide metabolic process carbohydrate metabolic process catabolic process carbohydrate catabolic process primary metabolic process D-xylose metabolic process D-xylose catabolic process small molecule metabolic process metabolic process cellular process monosaccharide catabolic process small molecule catabolic process pentose metabolic process pentose catabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR000581	Dihydroxy-acid/6-phosphogluconate dehydratase, N-terminal	Domain
A, B, C, D	IPR037237	IlvD/EDD, N-terminal domain	Homologous Superfamily
A, B, C, D	IPR042096	Dihydroxy-acid dehydratase, C-terminal	Homologous Superfamily
A, B, C, D	IPR020558	Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site	Conserved Site
A, B, C, D	IPR056740	Dihydroxy-acid/6-phosphogluconate dehydratase, C-terminal	Domain
A, B, C, D	IPR052352	Sugar Degradation Dehydratases	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.