Crystal structure of the ATP-cone-containing NrdB from Leeuwenhoekiella blandensis
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | ATP-cone | e5olkD1 | A: alpha arrays | X: RuvA-C | H: ATP cone (From Topology) | T: ATP cone | F: ATP-cone | ECOD (1.6) |
| D | Ribonuc_red_sm | e5olkD2 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: Ribonuc_red_sm | ECOD (1.6) |
| C | ATP-cone | e5olkC1 | A: alpha arrays | X: RuvA-C | H: ATP cone (From Topology) | T: ATP cone | F: ATP-cone | ECOD (1.6) |
| C | Ribonuc_red_sm | e5olkC2 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: Ribonuc_red_sm | ECOD (1.6) |
| B | ATP-cone | e5olkB2 | A: alpha arrays | X: RuvA-C | H: ATP cone (From Topology) | T: ATP cone | F: ATP-cone | ECOD (1.6) |
| B | Ribonuc_red_sm | e5olkB1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: Ribonuc_red_sm | ECOD (1.6) |
| A | ATP-cone | e5olkA2 | A: alpha arrays | X: RuvA-C | H: ATP cone (From Topology) | T: ATP cone | F: ATP-cone | ECOD (1.6) |
| A | Ribonuc_red_sm | e5olkA1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: Ribonuc_red_sm | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| D | 1.10.620.20 | Mainly Alpha | Orthogonal Bundle | Ribonucleotide Reductase, subunit A | Ribonucleotide Reductase, subunit A | CATH (utative) |
| C | 1.10.620.20 | Mainly Alpha | Orthogonal Bundle | Ribonucleotide Reductase, subunit A | Ribonucleotide Reductase, subunit A | CATH (utative) |
| B | 1.10.620.20 | Mainly Alpha | Orthogonal Bundle | Ribonucleotide Reductase, subunit A | Ribonucleotide Reductase, subunit A | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR009078 | Ferritin-like superfamily | Homologous Superfamily | |
| IPR000358 | Ribonucleotide reductase small subunit family | Family | |
| IPR033909 | Ribonucleotide reductase small subunit | Family | |
| IPR005144 | ATP-cone domain | Domain | |
| IPR012348 | Ribonucleotide reductase-like | Homologous Superfamily |














