5OLC | pdb_00005olc

Crystal structure of the 3,6-anhydro-D-galactonate cycloisomerase from Zobellia galactanivorans

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Hd5olch2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel Enolase C-terminal domain-like automated matches automated matches (Zobellia galactanivorans ) [TaxId: 63186 ], SCOPe (2.08)
Hd5olch1 Alpha and beta proteins (a+b) Enolase N-terminal domain-like Enolase N-terminal domain-like automated matches automated matches (Zobellia galactanivorans ) [TaxId: 63186 ], SCOPe (2.08)
Hd5olch3 Artifacts Tags Tags Tags N-terminal Tags (Zobellia galactanivorans ) [TaxId: 63186 ], SCOPe (2.08)
Gd5olcg2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel Enolase C-terminal domain-like automated matches automated matches (Zobellia galactanivorans ) [TaxId: 63186 ], SCOPe (2.08)
Gd5olcg1 Alpha and beta proteins (a+b) Enolase N-terminal domain-like Enolase N-terminal domain-like automated matches automated matches (Zobellia galactanivorans ) [TaxId: 63186 ], SCOPe (2.08)
Gd5olcg3 Artifacts Tags Tags Tags N-terminal Tags (Zobellia galactanivorans ) [TaxId: 63186 ], SCOPe (2.08)
Fd5olcf2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel Enolase C-terminal domain-like automated matches automated matches (Zobellia galactanivorans ) [TaxId: 63186 ], SCOPe (2.08)
Fd5olcf1 Alpha and beta proteins (a+b) Enolase N-terminal domain-like Enolase N-terminal domain-like automated matches automated matches (Zobellia galactanivorans ) [TaxId: 63186 ], SCOPe (2.08)
Fd5olcf3 Artifacts Tags Tags Tags N-terminal Tags (Zobellia galactanivorans ) [TaxId: 63186 ], SCOPe (2.08)
Ed5olce2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel Enolase C-terminal domain-like automated matches automated matches (Zobellia galactanivorans ) [TaxId: 63186 ], SCOPe (2.08)
Ed5olce1 Alpha and beta proteins (a+b) Enolase N-terminal domain-like Enolase N-terminal domain-like automated matches automated matches (Zobellia galactanivorans ) [TaxId: 63186 ], SCOPe (2.08)
Ed5olce3 Artifacts Tags Tags Tags N-terminal Tags (Zobellia galactanivorans ) [TaxId: 63186 ], SCOPe (2.08)
Dd5olcd2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel Enolase C-terminal domain-like automated matches automated matches (Zobellia galactanivorans ) [TaxId: 63186 ], SCOPe (2.08)
Dd5olcd1 Alpha and beta proteins (a+b) Enolase N-terminal domain-like Enolase N-terminal domain-like automated matches automated matches (Zobellia galactanivorans ) [TaxId: 63186 ], SCOPe (2.08)
Dd5olcd3 Artifacts Tags Tags Tags N-terminal Tags (Zobellia galactanivorans ) [TaxId: 63186 ], SCOPe (2.08)
Cd5olcc2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel Enolase C-terminal domain-like automated matches automated matches (Zobellia galactanivorans ) [TaxId: 63186 ], SCOPe (2.08)
Cd5olcc1 Alpha and beta proteins (a+b) Enolase N-terminal domain-like Enolase N-terminal domain-like automated matches automated matches (Zobellia galactanivorans ) [TaxId: 63186 ], SCOPe (2.08)
Cd5olcc3 Artifacts Tags Tags Tags N-terminal Tags (Zobellia galactanivorans ) [TaxId: 63186 ], SCOPe (2.08)
Bd5olcb2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel Enolase C-terminal domain-like automated matches automated matches (Zobellia galactanivorans ) [TaxId: 63186 ], SCOPe (2.08)
Bd5olcb1 Alpha and beta proteins (a+b) Enolase N-terminal domain-like Enolase N-terminal domain-like automated matches automated matches (Zobellia galactanivorans ) [TaxId: 63186 ], SCOPe (2.08)
Bd5olcb3 Artifacts Tags Tags Tags N-terminal Tags (Zobellia galactanivorans ) [TaxId: 63186 ], SCOPe (2.08)
Ad5olca2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel Enolase C-terminal domain-like automated matches automated matches (Zobellia galactanivorans ) [TaxId: 63186 ], SCOPe (2.08)
Ad5olca1 Alpha and beta proteins (a+b) Enolase N-terminal domain-like Enolase N-terminal domain-like automated matches automated matches (Zobellia galactanivorans ) [TaxId: 63186 ], SCOPe (2.08)
Ad5olca3 Artifacts Tags Tags Tags N-terminal Tags (Zobellia galactanivorans ) [TaxId: 63186 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
HATP-synt_Epse5olcH1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
GATP-synt_Epse5olcG1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
FATP-synt_Epse5olcF1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
EATP-synt_Epse5olcE1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
DATP-synt_Epse5olcD1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
CATP-synt_Epse5olcC1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
BATP-synt_Epse5olcB1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
AGFPe5olcA1 A: a/b three-layered sandwichesX: Protein kinase/SAICAR synthase/ATP-graspH: Protein kinase/SAICAR synthase/ATP-graspT: Undecaprenyl diphosphate synthaseF: GFPECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
H3.30.390.10 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (4.3.0)
H3.20.20.120 Alpha Beta Alpha-Beta Barrel TIM Barrel Enolase-like C-terminal domainCATH (4.3.0)
G3.30.390.10 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (4.3.0)
G3.20.20.120 Alpha Beta Alpha-Beta Barrel TIM Barrel Enolase-like C-terminal domainCATH (4.3.0)
F3.30.390.10 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (4.3.0)
F3.20.20.120 Alpha Beta Alpha-Beta Barrel TIM Barrel Enolase-like C-terminal domainCATH (4.3.0)
E3.30.390.10 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (4.3.0)
E3.20.20.120 Alpha Beta Alpha-Beta Barrel TIM Barrel Enolase-like C-terminal domainCATH (4.3.0)
D3.30.390.10 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (4.3.0)
D3.20.20.120 Alpha Beta Alpha-Beta Barrel TIM Barrel Enolase-like C-terminal domainCATH (4.3.0)
C3.30.390.10 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (4.3.0)
C3.20.20.120 Alpha Beta Alpha-Beta Barrel TIM Barrel Enolase-like C-terminal domainCATH (4.3.0)
B3.30.390.10 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (4.3.0)
B3.20.20.120 Alpha Beta Alpha-Beta Barrel TIM Barrel Enolase-like C-terminal domainCATH (4.3.0)
A3.30.390.10 Alpha Beta 2-Layer Sandwich Enolase-like domain 1CATH (4.3.0)
A3.20.20.120 Alpha Beta Alpha-Beta Barrel TIM Barrel Enolase-like C-terminal domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF02746Mandelate racemase / muconate lactonizing enzyme, N-terminal domain (MR_MLE_N)Mandelate racemase / muconate lactonizing enzyme, N-terminal domainSCOP reports fold similarity with enolase N-terminal domain. Domain
A, B, C, D, E
PF13378Enolase C-terminal domain-like (MR_MLE_C)Enolase C-terminal domain-likeThis domain appears at the C-terminus of many of the proteins that carry the MR_MLE_N Pfam:PF02746 domain. EC:4.2.1.40. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Galactonate dehydratase -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR029065Enolase_C-likeUnknown
A, B, C, D, E
IPR018110Mandelate racemase/muconate lactonizing enzyme, conserved siteConserved Site
A, B, C, D, E
IPR046945L-rhamnonate dehydratase-likeFamily
A, B, C, D, E
IPR013342Mandelate racemase, C-terminal domainDomain
A, B, C, D, E
IPR029017Enolase-like, N-terminalHomologous Superfamily
A, B, C, D, E
IPR036849Enolase-like, C-terminal domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR013341Mandelate racemase, N-terminal domainDomain