5OKL | pdb_00005okl

Human afamin monoclinic crystal form

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	ATP-synt_Eps	e5oklB1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: ATP-synt_Eps	ECOD (v294.1)
A	GFP	e5oklA1	A: a/b three-layered sandwiches	X: Protein kinase/SAICAR synthase/ATP-grasp	H: Protein kinase/SAICAR synthase/ATP-grasp	T: Undecaprenyl diphosphate synthase	F: GFP	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.246.10	Mainly Alpha	Orthogonal Bundle	Serum Albumin	Chain A, Domain 1	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF00273	Serum albumin family (Serum_albumin)	Serum albumin family		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Afamin	vitamin binding binding heterocyclic compound binding vitamin E binding small molecule binding	localization transport vitamin transport establishment of localization regulation of protein stability biological regulation regulation of biological quality protein stabilization establishment of protein localization protein transport macromolecule localization establishment of protein localization to extracellular region intracellular protein localization protein transport within extracellular region localization transport vitamin transport establishment of localization regulation of protein stability biological regulation regulation of biological quality protein stabilization establishment of protein localization protein transport macromolecule localization establishment of protein localization to extracellular region intracellular protein localization protein transport within extracellular region protein localization to extracellular region response to nutrient levels response to stimulus	cellular anatomical structure extracellular region extracellular space blood microparticle extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle organelle vesicle extracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR020857	Serum albumin, conserved site	Conserved Site
A, B	IPR000264	ALB/AFP/VDB	Family
A, B	IPR014760	Serum albumin, N-terminal	Domain
A, B	IPR020858	Serum albumin-like	Homologous Superfamily
A, B	IPR021177	Serum albumin/Alpha-fetoprotein/Afamin	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	Pharos: P43652	Liver Cirrhosis, Experimental acute kidney failure pancreatic ductal adenocarcinoma prostate carcinoma nephrosclerosis psoriasis

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.