Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad5o9aa1 Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Glutamate receptor ligand binding core Norway Rat (Rattus norvegicus ) [TaxId: 10116 ], Norway Rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)
Ad5o9aa2 Artifacts Tags Tags Tags N-terminal Tags Norway Rat (Rattus norvegicus ) [TaxId: 10116 ], Norway Rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)
Bd5o9ab1 Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Glutamate receptor ligand binding core Norway Rat (Rattus norvegicus ) [TaxId: 10116 ], Norway Rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)
Bd5o9ab2 Artifacts Tags Tags Tags N-terminal Tags Norway Rat (Rattus norvegicus ) [TaxId: 10116 ], Norway Rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)
Cd5o9ac1 Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Glutamate receptor ligand binding core Norway Rat (Rattus norvegicus ) [TaxId: 10116 ], Norway Rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)
Cd5o9ac2 Artifacts Tags Tags Tags N-terminal Tags Norway Rat (Rattus norvegicus ) [TaxId: 10116 ], Norway Rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)
Dd5o9ad1 Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Glutamate receptor ligand binding core Norway Rat (Rattus norvegicus ) [TaxId: 10116 ], Norway Rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)
Dd5o9ad2 Artifacts Tags Tags Tags N-terminal Tags Norway Rat (Rattus norvegicus ) [TaxId: 10116 ], Norway Rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ALig_chan_3e5o9aA2 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: Lig_chan_3ECOD (1.6)
ASBP_bac_3_1ste5o9aA1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: SBP_bac_3_1stECOD (1.6)
BLig_chan_3e5o9aB1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: Lig_chan_3ECOD (1.6)
BSBP_bac_3_1ste5o9aB2 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: SBP_bac_3_1stECOD (1.6)
CLig_chan_3e5o9aC2 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: Lig_chan_3ECOD (1.6)
CSBP_bac_3_1ste5o9aC1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: SBP_bac_3_1stECOD (1.6)
DLig_chan_3e5o9aD1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: Lig_chan_3ECOD (1.6)
DSBP_bac_3_1ste5o9aD2 A: a/b three-layered sandwichesX: Periplasmic binding protein-like II (From Topology)H: Periplasmic binding protein-like II (From Topology)T: Periplasmic binding protein-like IIF: SBP_bac_3_1stECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF00060Ligand-gated ion channel (Lig_chan)Ligand-gated ion channel- Family
A, B, C, D
PF10613Ligated ion channel L-glutamate- and glycine-binding site (Lig_chan-Glu_bd)Ligated ion channel L-glutamate- and glycine-binding siteThis region, sometimes called the S1 domain, is the luminal domain just upstream of the first, M1, transmembrane region of transmembrane ion-channel proteins, and it binds L-glutamate and glycine [2]. It is found in association with Lig_chan, Pfam:PF ...This region, sometimes called the S1 domain, is the luminal domain just upstream of the first, M1, transmembrane region of transmembrane ion-channel proteins, and it binds L-glutamate and glycine [2]. It is found in association with Lig_chan, Pfam:PF00060.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Glutamate receptor 2,Glutamate receptor 2