5NYV | pdb_00005nyv

Crystal structure determination from picosecond infrared laser ablated protein crystals by serial synchrotron crystallography

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd5nyvb_ Alpha and beta proteins (a/b) alpha/beta-Hydrolases alpha/beta-Hydrolases automated matches automated matches (Rhodopseudomonas palustris ATCC 17001 ) [TaxId: 74570 ], SCOPe (2.08)
Ad5nyva_ Alpha and beta proteins (a/b) alpha/beta-Hydrolases alpha/beta-Hydrolases automated matches automated matches (Rhodopseudomonas palustris ATCC 17001 ) [TaxId: 74570 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BIg_2e5nyvB1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: Ig_2ECOD (v294.1)
AV-sete5nyvA1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: V-setECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.40.50.1820 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Alpha/Beta hydrolase fold, catalytic domainCATH (4.3.0)
A3.40.50.1820 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Alpha/Beta hydrolase fold, catalytic domainCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Fluoroacetate dehalogenase - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR000639Epoxide hydrolase-likeFamily
A, B
IPR000073Alpha/beta hydrolase fold-1Domain
A, B
IPR029058Alpha/Beta hydrolase foldHomologous Superfamily