5NS3 | pdb_00005ns3

Crystal structures of Cy5 cyanine fluorophores stacked onto the end of double-stranded RNA

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ARibosomal_L5_Ce5ns3A1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
BRibosomal_L5_Ce5ns3B1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
A, B
PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C, D
double-stranded RNA---
A, B
50S ribosomal protein L5

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
A, B
IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
A, B
IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
A, B
IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
A, B
IPR002132Large ribosomal subunit protein uL5Family
A, B
IPR020930Large ribosomal subunit protein uL5, bacteriaFamily