Skip to main content

 5NQZ | pdb_00005nqz

Structure of a fHbp(V1.1):PorA(P1.16) chimera. Fusion at fHbp position 309.

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BGlyco_transf_4e5nqzB1 A: alpha arraysX: FAD-linked reductases, C-terminal domain-likeH: FAD-linked reductases-CT: FAD-linked reductases-CF: Glyco_transf_4ECOD (v295.2)
AV-sete5nqzA1 A: alpha arraysX: FAD-linked reductases, C-terminal domain-likeH: FAD-linked reductases-CT: FAD-linked reductases-CF: V-setECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.60.40.1980 Mainly Beta Sandwich Immunoglobulin-like CATH (4.3.0)
B2.40.160.90 Mainly Beta Beta Barrel Porin CATH (4.3.0)
A2.60.40.1980 Mainly Beta Sandwich Immunoglobulin-like CATH (4.3.0)
A2.40.160.90 Mainly Beta Beta Barrel Porin CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF08794Factor H binding protein, C-terminal (FHBP_C)Factor H binding protein, C-terminalFactor H binding protein (also known as GNA1870) is a surface exposed lipoprotein in Neisseria meningitidis that is a potent antigen and a potential candidate for a vaccine against meningococcal disease [1-4]. The structure of the C-terminal domain c ...Factor H binding protein (also known as GNA1870) is a surface exposed lipoprotein in Neisseria meningitidis that is a potent antigen and a potential candidate for a vaccine against meningococcal disease [1-4]. The structure of the C-terminal domain consists of an anti-parallel beta barrel overlaid by a short alpha helical region [1,5]. This domain is highly similar to Transferrin-binding protein B beta barrel (Pfam:PF01298).
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Factor H binding protein,Major outer membrane protein P.IA,Factor H binding protein

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR050298Gram-negative bacterial outer membrane porinFamily
A, B
IPR033900Porin domain, Gram-negative typeDomain
A, B
IPR023614Porin domain superfamilyHomologous Superfamily
A, B
IPR002299Porin, Neisseria sp. typeFamily
A, B
IPR001702Porin, Gram-negative typeFamily
A, B
IPR013793Porin, Gram-negative type, conserved siteConserved Site
A, B
IPR014902Factor H binding protein-like, C-terminalDomain
A, B
IPR049377Factor H binding protein, N-terminalDomain
A, B
IPR011250Outer membrane protein/outer membrane enzyme PagP-like, beta-barrel superfamilyHomologous Superfamily
A, B
IPR049378Factor H binding proteinFamily