5NNZ | pdb_00005nnz

Crystal structure of human ODA16

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B [auth A]	Acetyltransf_1	e5nnzA1	A: a/b three-layered sandwiches	X: Beta domain of coronavirus spike glycoprotein	H: HAMP domain	T: Polymerase basic protein 2 cap-binding domain	F: Acetyltransf_1	ECOD (v294.1)
A [auth B]	Acetyltransf_1	e5nnzB1	A: a/b three-layered sandwiches	X: Beta domain of coronavirus spike glycoprotein	H: HAMP domain	T: Polymerase basic protein 2 cap-binding domain	F: Acetyltransf_1	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth B], B [auth A]	PF00400	WD domain, G-beta repeat (WD40)	WD domain, G-beta repeat	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth B], B [auth A]	Dynein assembly factor with WDR repeat domains 1	ubiquitin-like ligase-substrate adaptor activity enzyme-substrate adaptor activity protein-macromolecule adaptor activity molecular adaptor activity	organelle assembly plasma membrane bounded cell projection organization axonemal dynein complex assembly protein-containing complex organization cell projection organization microtubule cytoskeleton organization plasma membrane bounded cell projection assembly cellular component organization cellular component biogenesis microtubule bundle formation organelle organization cellular component assembly outer dynein arm assembly protein-containing complex assembly cilium assembly organelle assembly plasma membrane bounded cell projection organization axonemal dynein complex assembly protein-containing complex organization cell projection organization microtubule cytoskeleton organization plasma membrane bounded cell projection assembly cellular component organization cellular component biogenesis microtubule bundle formation organelle organization cellular component assembly outer dynein arm assembly protein-containing complex assembly cilium assembly cellular process microtubule-based process cellular component organization or biogenesis axoneme assembly cytoskeleton organization cilium organization cell projection assembly developmental process multicellular organism development multicellular organismal process determination of bilateral symmetry anatomical structure development pattern specification process determination of left/right symmetry left/right pattern formation regionalization specification of symmetry system process nervous system process transport establishment of localization localization epithelial cilium movement involved in extracellular fluid movement extracellular transport microtubule-based transport microtubule-based movement cerebrospinal fluid circulation cilium movement protein polyubiquitination primary metabolic process protein ubiquitination macromolecule modification metabolic process protein metabolic process macromolecule metabolic process post-translational protein modification protein modification process protein modification by small protein conjugation protein modification by small protein conjugation or removal heart development animal organ development circulatory system development system development cellular localization intracellular transport establishment of localization in cell transport along microtubule cytoskeleton-dependent intracellular transport intraciliary transport	membrane-bounded organelle cell projection cellular anatomical structure organelle cilium plasma membrane bounded cell projection extracellular region cullin-RING ubiquitin ligase complex protein-containing complex ubiquitin ligase complex catalytic complex SCF ubiquitin ligase complex transferase complex intracellular protein-containing complex membrane-bounded organelle cell projection cellular anatomical structure organelle cilium plasma membrane bounded cell projection extracellular region cullin-RING ubiquitin ligase complex protein-containing complex ubiquitin ligase complex catalytic complex SCF ubiquitin ligase complex transferase complex intracellular protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ciliary basal body microtubule organizing center cytoskeleton membraneless organelle microtubule cytoskeleton

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth B], B [auth A]	IPR019775	WD40 repeat, conserved site	Conserved Site
A [auth B], B [auth A]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
A [auth B], B [auth A]	IPR020472	PAC1/LIS1-like, WD-40 repeat	Repeat
A [auth B], B [auth A]	IPR001680	WD40 repeat	Repeat
A [auth B], B [auth A]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A [auth B], B [auth A]	Pharos: Q8N136	allergic rhinitis inflammatory bowel disease Malignant neoplasm of breast primary biliary cholangitis astrocytic tumor lung carcinoma medulloblastoma psoriasis facioscapulohumeral muscular dystrophy malignant ependymoma nasopharyngeal carcinoma ulcerative colitis

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.