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 5NM0 | pdb_00005nm0

Nb36 Ser85Cys with Hg, crystal form 1

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Dd5nm0d1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) automated matches Llama (Lama glama ) [TaxId: 9844 ], SCOPe (2.08)
Dd5nm0d2 Artifacts Tags Tags Tags C-terminal Tags Llama (Lama glama ) [TaxId: 9844 ], SCOPe (2.08)
Cd5nm0c1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) automated matches Llama (Lama glama ) [TaxId: 9844 ], SCOPe (2.08)
Cd5nm0c2 Artifacts Tags Tags Tags C-terminal Tags Llama (Lama glama ) [TaxId: 9844 ], SCOPe (2.08)
Bd5nm0b1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) automated matches Llama (Lama glama ) [TaxId: 9844 ], SCOPe (2.08)
Bd5nm0b2 Artifacts Tags Tags Tags C-terminal Tags Llama (Lama glama ) [TaxId: 9844 ], SCOPe (2.08)
Ad5nm0a1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) automated matches Llama (Lama glama ) [TaxId: 9844 ], SCOPe (2.08)
Ad5nm0a2 Artifacts Tags Tags Tags C-terminal Tags Llama (Lama glama ) [TaxId: 9844 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DAcetyltransf_1e5nm0D1 A: alpha arraysX: Profilin-likeH: NucleotidyltransferaseT: NucleotidyltransferaseF: Acetyltransf_1ECOD (v295.2)
CAcetyltransf_1e5nm0C1 A: alpha arraysX: Profilin-likeH: NucleotidyltransferaseT: NucleotidyltransferaseF: Acetyltransf_1ECOD (v295.2)
BAcetyltransf_1e5nm0B1 A: alpha arraysX: Profilin-likeH: NucleotidyltransferaseT: NucleotidyltransferaseF: Acetyltransf_1ECOD (v295.2)
AAcetyltransf_1e5nm0A1 A: alpha arraysX: Profilin-likeH: NucleotidyltransferaseT: NucleotidyltransferaseF: Acetyltransf_1ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
C2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
B2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
A, B, C, D
Nanobody Nb36, S85C VH Lama glama (llama) IGHV3S3*01, IGHJ4*01 V-DOMAIN VH IG VH IMGT (202639-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
A, B, C, D
Heavy ChainIGHV1 --SAbDab (2026-10-09)