Crystal structure of Chlamydomonas IFT80
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | ANAPC4_WD40_7 | e5n4aA1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: ANAPC4_WD40_7 | ECOD (1.6) |
| A | ANAPC4_WD40_15 | e5n4aA2 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: ANAPC4_WD40_15 | ECOD (1.6) |
| A | Nup84_Nup100 | e5n4aA3 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Intraflagellar transport protein 80 (IFT80) C-terminal domain (From Topology) | T: Intraflagellar transport protein 80 (IFT80) C-terminal domain | F: Nup84_Nup100 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF23335 | IFT80 second beta-propeller (Beta-prop_IFT80_2nd) | IFT80 second beta-propeller | - | Repeat | |
| PF23387 | IFT80/172/WDR35/WDR19 TPR domain (TPR_IFT80_172) | IFT80/172/WDR35/WDR19 TPR domain | - | Repeat | |
| PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Intraflagellar transport protein 80 | - |
|
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR056456 | IFT80, second beta-propeller domain | Domain | |
| IPR001680 | WD40 repeat | Repeat | |
| IPR056157 | IFT80/172/WDR35, TPR domain | Domain | |
| IPR036322 | WD40-repeat-containing domain superfamily | Homologous Superfamily | |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily |
