5MZY | pdb_00005mzy

Crystal structure of the decarboxylase AibA/AibB in complex with a possible transition state analog

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D [auth B]	d5mzyb_	Alpha and beta proteins (a/b)	NagB/RpiA/CoA transferase-like	NagB/RpiA/CoA transferase-like	automated matches	automated matches	(Myxococcus xanthus DK 1622 ) [TaxId: 246197 ],	SCOPe (2.08)
C [auth D]	d5mzyd_	Alpha and beta proteins (a/b)	NagB/RpiA/CoA transferase-like	NagB/RpiA/CoA transferase-like	automated matches	automated matches	(Myxococcus xanthus DK 1622 ) [TaxId: 246197 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D [auth B]	Plexin_RBD	e5mzyB1	A: a/b three-layered sandwiches	X: Beta domain of coronavirus spike glycoprotein	H: HAMP domain	T: Polymerase basic protein 2 cap-binding domain	F: Plexin_RBD	ECOD (v294.1)
C [auth D]	Plexin_RBD	e5mzyD1	A: a/b three-layered sandwiches	X: Beta domain of coronavirus spike glycoprotein	H: HAMP domain	T: Polymerase basic protein 2 cap-binding domain	F: Plexin_RBD	ECOD (v294.1)
B [auth C]	Plexin_RBD	e5mzyC1	A: a/b three-layered sandwiches	X: Beta domain of coronavirus spike glycoprotein	H: HAMP domain	T: Polymerase basic protein 2 cap-binding domain	F: Plexin_RBD	ECOD (v294.1)
A	Plexin_RBD	e5mzyA1	A: a/b three-layered sandwiches	X: Beta domain of coronavirus spike glycoprotein	H: HAMP domain	T: Polymerase basic protein 2 cap-binding domain	F: Plexin_RBD	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
C [auth D], D [auth B]	PF01144	Coenzyme A transferase (CoA_trans)	Coenzyme A transferase		Domain
A, B [auth C]	PF01144	Coenzyme A transferase (CoA_trans)	Coenzyme A transferase		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C [auth D], D [auth B]	Glutaconate CoA-transferase family, subunit B	transferase activity, transferring sulphur-containing groups transferase activity catalytic activity CoA-transferase activity	-	-
A, B [auth C]	Glutaconate CoA-transferase family, subunit A	transferase activity, transferring sulphur-containing groups transferase activity catalytic activity CoA-transferase activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C [auth D], D [auth B]	IPR037171	NagB/RpiA transferase-like	Homologous Superfamily
C [auth D], D [auth B]	IPR004165	Coenzyme A transferase family I	Family
A, B [auth C]	IPR037171	NagB/RpiA transferase-like	Homologous Superfamily
A, B [auth C]	IPR004165	Coenzyme A transferase family I	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.