5MR7 | pdb_00005mr7

Crystal structure of the DBD domain of human Grhl2

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B		e5mr7B1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Parafibromin N-terminal domain	T: Parafibromin N-terminal domain	F:	ECOD (v294.1)
A		e5mr7A1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: Parafibromin N-terminal domain	T: Parafibromin N-terminal domain	F:	ECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Grainyhead-like protein 2 homolog	DNA binding sequence-specific DNA binding binding double-stranded DNA binding nucleic acid binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding transcription regulatory region nucleic acid binding RNA polymerase II cis-regulatory region sequence-specific DNA binding transcription regulator activity DNA-binding transcription factor activity DNA-binding transcription activator activity DNA binding sequence-specific DNA binding binding double-stranded DNA binding nucleic acid binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding transcription regulatory region nucleic acid binding RNA polymerase II cis-regulatory region sequence-specific DNA binding transcription regulator activity DNA-binding transcription factor activity DNA-binding transcription activator activity intronic transcription regulatory region sequence-specific DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific chromatin binding chromatin DNA binding transcription factor binding protein binding DNA-binding transcription factor binding DNA-binding transcription activator activity, RNA polymerase II-specific identical protein binding	developmental process multicellular organism development multicellular organismal process head development central nervous system development anatomical structure development animal organ development brain development nervous system development system development epithelium development epidermal cell differentiation cellular developmental process epidermis development developmental process multicellular organism development multicellular organismal process head development central nervous system development anatomical structure development animal organ development brain development nervous system development system development epithelium development epidermal cell differentiation cellular developmental process epidermis development tissue development epithelial cell differentiation skin development cell differentiation keratinocyte differentiation cellular process tube development lung lobe morphogenesis respiratory tube development anatomical structure morphogenesis lung lobe development lung development respiratory system development lung morphogenesis animal organ morphogenesis sensory organ development eye development visual system development camera-type eye development sensory system development epithelium migration tissue migration embryonic organ morphogenesis embryonic cranial skeleton morphogenesis chordate embryonic development embryonic morphogenesis embryo development embryo development ending in birth or egg hatching skeletal system development cranial skeletal system development embryonic skeletal system development skeletal system morphogenesis embryonic organ development embryonic skeletal system morphogenesis heart development cardiac chamber morphogenesis heart morphogenesis circulatory system development cardiac ventricle morphogenesis cardiac chamber development cardiac ventricle development cell development cell morphogenesis epithelial cell development epithelial cell morphogenesis cell differentiation involved in embryonic placenta development epithelial cell differentiation involved in embryonic placenta development reproductive process labyrinthine layer development developmental process involved in reproduction embryonic placenta development epithelial cell morphogenesis involved in placental branching placenta development morphogenesis of an epithelium branching involved in labyrinthine layer morphogenesis in utero embryonic development embryonic placenta morphogenesis labyrinthine layer morphogenesis tissue morphogenesis morphogenesis of a branching structure morphogenesis of a branching epithelium embryonic epithelial tube formation anterior neural tube closure tube formation epithelial tube formation tube morphogenesis primary neural tube formation epithelial tube morphogenesis morphogenesis of embryonic epithelium neural tube development neural tube closure neural tube formation anatomical structure formation involved in morphogenesis tube closure bicellular tight junction assembly tight junction organization apical junction assembly cellular component organization cellular component biogenesis cell junction organization cellular component assembly cell junction assembly tight junction assembly cellular component organization or biogenesis cell-cell junction assembly cell-cell junction organization cell adhesion lung epithelium development lung epithelial cell differentiation lung cell differentiation regulation of cellular process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process transcription by RNA polymerase II regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of transcription by RNA polymerase II regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process metabolic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription macromolecule metabolic process regulation of metabolic process multicellular organism growth developmental growth growth positive regulation of DNA-templated transcription positive regulation of biological process positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process positive regulation of cellular process positive regulation of transcription by RNA polymerase II positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process limb development appendage development embryonic limb morphogenesis embryonic appendage morphogenesis appendage morphogenesis embryonic digit morphogenesis limb morphogenesis face development	cellular anatomical structure membrane cell-cell junction anchoring junction cell junction membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen cellular anatomical structure membrane cell-cell junction anchoring junction cell junction membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen organelle nuclear lumen membraneless organelle intracellular membraneless organelle chromatin chromosome

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR057520	GRHL1/CP2, C-terminal domain	Domain
A, B	IPR007604	CP2 transcription factor	Domain
A, B	IPR040167	Transcription factor CP2-like	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	Pharos: Q6ISB3	autosomal dominant nonsyndromic deafness 28 nail and teeth abnormalities-marginal palmoplantar keratoderma-oral hyperpigmentation syndrome nonsyndromic genetic deafness interstitial cystitis ovarian cancer spina bifida corneal dystrophy, posterior polymorphous, 4 invasive ductal breast carcinoma non-small cell lung carcinoma psoriasis ductal breast carcinoma in situ lung cancer rheumatoid arthritis

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.