Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a polyadenylated mRNA.
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B | SCOP2B Superfamily | Translational proteins | 8078357 | 3000811 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | Ribosomal protein L16p/L10e | 8097320 | 3000884 | SCOP2B (2022-06-29) |
| J | SCOP2B Superfamily | RL5-like | 8073894 | 3001709 | SCOP2B (2022-06-29) |
| M [auth N] | SCOP2B Superfamily | Ribosomal proteins S24e, L23 and L15e | 8082477 | 3000210 | SCOP2B (2022-06-29) |
| U [auth V] | SCOP2B Superfamily | 50S Ribosomal protein L14-like | 8072048 | 3000433 | SCOP2B (2022-06-29) |
| W [auth X] | SCOP2B Superfamily | Ribosomal proteins S24e, L23 and L15e | 8095966 | 3000210 | SCOP2B (2022-06-29) |
| X [auth Y] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8076754 | 3000334 | SCOP2B (2022-06-29) |
| Y [auth Z] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8053047 | 3000334 | SCOP2B (2022-06-29) |
| Z [auth a] | SCOP2B Superfamily | Ribosomal proteins L15p and L18e | 8097818 | 3001045 | SCOP2B (2022-06-29) |
| BA [auth c] | SCOP2B Superfamily | L30e-like | 8094953 | 3001739 | SCOP2B (2022-06-29) |
| DA [auth e] | SCOP2B Superfamily | Ribosomal protein L32e | 8102088 | 3000982 | SCOP2B (2022-06-29) |
| EA [auth f] | SCOP2B Superfamily | Translational proteins | 8093714 | 3000811 | SCOP2B (2022-06-29) |
| HA [auth i] | SCOP2B Superfamily | Ribosomal protein L36e | 8053119 | 3002161 | SCOP2B (2022-06-29) |
| KA [auth l] | SCOP2B Superfamily | Ribosomal protein L39e | 8095597 | 3001756 | SCOP2B (2022-06-29) |
| OA [auth p] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8101435 | 3001320 | SCOP2B (2022-06-29) |
| ZA [auth BB] | SCOP2B Superfamily | Ribosomal S3Ae-like | 8053216 | 3002166 | SCOP2B (2022-06-29) |
| DB [auth FF] | SCOP2B Superfamily | Ribosomal protein S7 | 8066001 | 3000799 | SCOP2B (2022-06-29) |
| IB [auth KK] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8055720 | 3000034 | SCOP2B (2022-06-29) |
| JB [auth LL] | SCOP2B Superfamily | Ribosomal S17 N-terminal domain-like | 8052708 | 3002138 | SCOP2B (2022-06-29) |
| JB [auth LL] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8052707 | 3000135 | SCOP2B (2022-06-29) |
| KB [auth MM] | SCOP2B Superfamily | L30e-like | 8063980 | 3001739 | SCOP2B (2022-06-29) |
| LB [auth NN] | SCOP2B Superfamily | Homeodomain-like | 8052970 | 3000001 | SCOP2B (2022-06-29) |
| LB [auth NN] | SCOP2B Superfamily | S15/NS1 RNA-binding domain | 8052971 | 3001284 | SCOP2B (2022-06-29) |
| MB [auth OO] | SCOP2B Superfamily | Translational machinery components | 8097824 | 3000571 | SCOP2B (2022-06-29) |
| OB [auth QQ] | SCOP2B Superfamily | Ribosomal protein S5 domain 2-like | 8082683 | 3000100 | SCOP2B (2022-06-29) |
| QB [auth SS] | SCOP2B Superfamily | S13-like H2TH domain | 8101439 | 3000053 | SCOP2B (2022-06-29) |
| RB [auth TT] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8089322 | 3000034 | SCOP2B (2022-06-29) |
| SB [auth UU] | SCOP2B Superfamily | Ribosomal protein S10 | 8097814 | 3001336 | SCOP2B (2022-06-29) |
| UB [auth WW] | SCOP2B Superfamily | Ribosomal protein S8 | 8079081 | 3000709 | SCOP2B (2022-06-29) |
| XB [auth ZZ] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8090991 | 3000034 | SCOP2B (2022-06-29) |
| AC [auth cc] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8095265 | 3000135 | SCOP2B (2022-06-29) |
| BC [auth dd] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8052584 | 3000068 | SCOP2B (2022-06-29) |
| CC [auth ee] | SCOP2B Superfamily | Ribosomal protein S30e-like | 8053455 | 3002190 | SCOP2B (2022-06-29) |
| GC [auth ii] | SCOP2B Superfamily | L30e-like | 8033390 | 3001739 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Dynamin_N | e5lzyA1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| B | Dynamin_N | e5lzyB1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| C | Ribos_L4_asso_C | e5lzyC1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Class I glutamine amidotransferase-like | F: Ribos_L4_asso_C | ECOD (v295.2) |
| D | Dynamin_N | e5lzyD1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| E | Dynamin_N | e5lzyE1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| F | Dynamin_N | e5lzyF1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| H | Dynamin_N | e5lzyH1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| I | Dynamin_N | e5lzyI1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| J | Dynamin_N | e5lzyJ1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| K [auth L] | Dynamin_N | e5lzyL1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| L [auth M] | Dynamin_N | e5lzyM1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| M [auth N] | Dynamin_N | e5lzyN1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| N [auth O] | Dynamin_N | e5lzyO1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| O [auth P] | Dynamin_N | e5lzyP1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| P [auth Q] | Dynamin_N | e5lzyQ1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| Q [auth R] | Dynamin_N | e5lzyR1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| R [auth S] | Dynamin_N | e5lzyS1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| S [auth T] | Dynamin_N | e5lzyT1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| T [auth U] | Dynamin_N | e5lzyU1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| U [auth V] | Dynamin_N | e5lzyV1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| V [auth W] | Dynamin_N | e5lzyW1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| W [auth X] | Dynamin_N | e5lzyX1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| X [auth Y] | Dynamin_N | e5lzyY1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| Y [auth Z] | Dynamin_N | e5lzyZ1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| Z [auth a] | WD40 | e5lzya1 | A: alpha arrays | X: P-loop domains-like | H: Cas7-related | T: CRISPR-associated protein Cas7f/Csy3 | F: WD40 | ECOD (v295.2) |
| AA [auth b] | Dynamin_N | e5lzyb1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| BA [auth c] | Dynamin_N | e5lzyc1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| CA [auth d] | Dynamin_N | e5lzyd1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| DA [auth e] | Dynamin_N | e5lzye1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| EA [auth f] | Dynamin_N | e5lzyf1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| FA [auth g] | Dynamin_N | e5lzyg1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| GA [auth h] | Dynamin_N | e5lzyh1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| HA [auth i] | Dynamin_N | e5lzyi1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| IA [auth j] | Dynamin_N | e5lzyj1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| JA [auth k] | Dynamin_N | e5lzyk1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| KA [auth l] | Dynamin_N | e5lzyl1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| LA [auth m] | Dynamin_N | e5lzym1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| MA [auth n] | Dynamin_N | e5lzyn1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| NA [auth o] | Dynamin_N | e5lzyo1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| OA [auth p] | Dynamin_N | e5lzyp1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| PA [auth r] | Dynamin_N | e5lzyr1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| QA [auth s] | Dynamin_N | e5lzys1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| RA [auth t] | Dynamin_N | e5lzyt1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| YA [auth AA] | Dynamin_N | e5lzyAA1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| ZA [auth BB] | Dynamin_N | e5lzyBB1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| AB [auth CC] | Dynamin_N | e5lzyCC1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| AB [auth CC] | e5lzyCC2 | A: alpha arrays | X: TIM beta/alpha-barrel | H: TIM barrels | T: TIM barrels | F: | ECOD (v295.2) | |
| BB [auth DD] | Dynamin_N | e5lzyDD1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| CB [auth EE] | Dynamin_N | e5lzyEE1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| DB [auth FF] | Dynamin_N | e5lzyFF1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| EB [auth GG] | Dynamin_N | e5lzyGG1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| FB [auth HH] | Dynamin_N | e5lzyHH1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| GB [auth II] | Dynamin_N | e5lzyII1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| HB [auth JJ] | Dynamin_N | e5lzyJJ1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| IB [auth KK] | Dynamin_N | e5lzyKK1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| JB [auth LL] | Dynamin_N | e5lzyLL1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| KB [auth MM] | Dynamin_N | e5lzyMM1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| LB [auth NN] | Dynamin_N | e5lzyNN1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| MB [auth OO] | Dynamin_N | e5lzyOO1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| NB [auth PP] | Dynamin_N | e5lzyPP1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| OB [auth QQ] | Dynamin_N | e5lzyQQ1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| PB [auth RR] | Dynamin_N | e5lzyRR1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| QB [auth SS] | Dynamin_N | e5lzySS1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| RB [auth TT] | Dynamin_N | e5lzyTT1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| SB [auth UU] | Dynamin_N | e5lzyUU1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| TB [auth VV] | Dynamin_N | e5lzyVV1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| UB [auth WW] | Dynamin_N | e5lzyWW1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| VB [auth XX] | Dynamin_N | e5lzyXX1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| WB [auth YY] | Dynamin_N | e5lzyYY1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| XB [auth ZZ] | Dynamin_N | e5lzyZZ1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| YB [auth aa] | Dynamin_N | e5lzyaa1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| ZB [auth bb] | Dynamin_N | e5lzybb1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| AC [auth cc] | Dynamin_N | e5lzycc1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| BC [auth dd] | Dynamin_N | e5lzydd1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| CC [auth ee] | Dynamin_N | e5lzyee1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| DC [auth ff] | Dynamin_N | e5lzyff1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| EC [auth gg] | Dynamin_N | e5lzygg1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| GC [auth ii] | Dynamin_N | e5lzyii1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| HC [auth jj] | Dynamin_N | e5lzyjj1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
| G | Dynamin_N | e5lzyG1 | A: alpha arrays | X: OB-fold | H: Nucleic acid-binding protein | T: Nucleic acid-binding protein | F: Dynamin_N | ECOD (v295.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF03947 | Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C) | Ribosomal Proteins L2, C-terminal domain | Domain | ||
| PF00828 | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A) | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A | This family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. | Domain | |
| PF01779 | Ribosomal L29e protein family (Ribosomal_L29e) | Ribosomal L29e protein family | - | Family | |
| PF01248 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae) | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ... | Domain | |
| PF17144 | Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e) | Ribosomal large subunit proteins 60S L5, and 50S L18 | - | Family | |
| PF01198 | Ribosomal protein L31e (Ribosomal_L31e) | Ribosomal protein L31e | - | Family | |
| PF14204 | Ribosomal L18 C-terminal region (Ribosomal_L18_c) | Ribosomal L18 C-terminal region | This domain is the C-terminal end of ribosomal L18/L5 proteins. | Domain | |
| PF01655 | Ribosomal protein L32 (Ribosomal_L32e) | Ribosomal protein L32 | - | Family | |
| PF01159 | Ribosomal protein L6e (Ribosomal_L6e) | Ribosomal protein L6e | - | Family | |
| PF00327 | Ribosomal protein L30p/L7e (Ribosomal_L30) | Ribosomal protein L30p/L7e | This family includes prokaryotic L30 and eukaryotic L7. | Domain | |
| PF01247 | Ribosomal protein L35Ae (Ribosomal_L35Ae) | Ribosomal protein L35Ae | This entry represents the ribosomal eL33 previously known as L35A, eukaryotic and archaebacterial ribosomal proteins. | Domain | |
| PF00347 | Ribosomal protein L6 (Ribosomal_L6) | Ribosomal protein L6 | Domain | ||
| PF00831 | Ribosomal L29 protein (Ribosomal_L29) | Ribosomal L29 protein | - | Family | |
| PF00252 | Ribosomal protein L16p/L10e (Ribosomal_L16) | Ribosomal protein L16p/L10e | Domain | ||
| PF01158 | Ribosomal protein L36e (Ribosomal_L36e) | Ribosomal protein L36e | - | Family | |
| PF00281 | Ribosomal protein L5 (Ribosomal_L5) | Ribosomal protein L5 | Domain | ||
| PF00673 | ribosomal L5P family C-terminus (Ribosomal_L5_C) | ribosomal L5P family C-terminus | This region is found associated with Pfam:PF00281. | Domain | |
| K [auth L] | PF00832 | Ribosomal L39 protein (Ribosomal_L39) | Ribosomal L39 protein | - | Family |
| L [auth M] | PF01929 | Ribosomal protein L14 (Ribosomal_L14e) | Ribosomal protein L14 | - | Family |
| M [auth N] | PF00827 | Ribosomal L15 (Ribosomal_L15e) | Ribosomal L15 | - | Family |
| N [auth O] | PF00935 | Ribosomal protein L44 (Ribosomal_L44) | Ribosomal protein L44 | - | Family |
| O [auth P] | PF00237 | Ribosomal protein L22p/L17e (Ribosomal_L22) | Ribosomal protein L22p/L17e | This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. | Domain |
| O [auth P] | PF01780 | Ribosomal L37ae protein family (Ribosomal_L37ae) | Ribosomal L37ae protein family | - | Family |
| Q [auth R] | PF01778 | Ribosomal L28e protein family (Ribosomal_L28e) | Ribosomal L28e protein family | - | Family |
| S [auth T] | PF03946 | Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N) | Ribosomal protein L11, N-terminal domain | The N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. | Domain |
| S [auth T] | PF00298 | Ribosomal protein L11, RNA binding domain (Ribosomal_L11) | Ribosomal protein L11, RNA binding domain | Domain | |
| U [auth V] | PF00238 | Ribosomal protein L14p/L23e (Ribosomal_L14) | Ribosomal protein L14p/L23e | Domain | |
| V [auth W] | PF01246 | Ribosomal protein L24e (Ribosomal_L24e) | Ribosomal protein L24e | Domain | |
| W [auth X] | PF00276 | Ribosomal protein L23 (Ribosomal_L23) | Ribosomal protein L23 | - | Family |
| X [auth Y] | PF16906 | Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26) | Ribosomal proteins L26 eukaryotic, L24P archaeal | - | Family |
| X [auth Y] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |
| Y [auth Z] | PF01777 | Ribosomal L27e protein family (Ribosomal_L27e) | Ribosomal L27e protein family | The N-terminal region of the eukaryotic ribosomal L27 has the KOW motif. C-terminal region is represented by this family. | Domain |
| Y [auth Z] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |
| ZA [auth BB] | PF01667 | Ribosomal protein S27 (Ribosomal_S27e) | Ribosomal protein S27 | - | Family |
| AB [auth CC] | PF01200 | Ribosomal protein S28e (Ribosomal_S28e) | Ribosomal protein S28e | Domain | |
| BB [auth DD] | PF07650 | KH domain (KH_2) | KH domain | Domain | |
| BB [auth DD] | PF00253 | Ribosomal protein S14p/S29e (Ribosomal_S14) | Ribosomal protein S14p/S29e | - | Family |
| BB [auth DD] | PF00189 | Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C) | Ribosomal protein S3, C-terminal domain | This family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. | Domain |
| DB [auth FF] | PF00177 | Ribosomal protein S7p/S5e (Ribosomal_S7) | Ribosomal protein S7p/S5e | This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. | Domain |
| DB [auth FF] | PF01599 | Ribosomal protein S27a (Ribosomal_S27) | Ribosomal protein S27a | This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ... | Domain |
| EB [auth GG] | PF01092 | Ribosomal protein S6e (Ribosomal_S6e) | Ribosomal protein S6e | - | Family |
| EB [auth GG] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
| FB [auth HH] | PF01251 | Ribosomal protein S7e (Ribosomal_S7e) | Ribosomal protein S7e | - | Family |
| GB [auth II] | PF26356 | Pelota N-terminal domain (Pelota_N) | Pelota N-terminal domain | This entry represents the N-terminal domain found in Pelota family proteins. The Pelota protein family is involved in recognizing stalled ribosomes and facilitating the No-Go Decay (NGD) pathway. Members of this family can destabilize mRNA in the rib ... | Domain |
| GB [auth II] | PF03464 | eRF1 domain 2 (eRF1_2) | eRF1 domain 2 | The release factor eRF1 terminates protein biosynthesis by recognising stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known [1]. The o ... | Domain |
| HB [auth JJ] | PF00163 | Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4) | Ribosomal protein S4/S9 N-terminal domain | - | Family |
| HB [auth JJ] | PF01479 | S4 domain (S4) | S4 domain | The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ... | Domain |
| IB [auth KK] | PF03501 | Plectin/S10 domain (S10_plectin) | Plectin/S10 domain | This presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding. | Domain |
| JB [auth LL] | PF16205 | Ribosomal_S17 N-terminal (Ribosomal_S17_N) | Ribosomal_S17 N-terminal | - | Family |
| JB [auth LL] | PF00366 | Ribosomal protein S17 (Ribosomal_S17) | Ribosomal protein S17 | Domain | |
| KB [auth MM] | PF01248 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae) | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ... | Domain |
| LB [auth NN] | PF00312 | Ribosomal protein S15 (Ribosomal_S15) | Ribosomal protein S15 | Domain | |
| MB [auth OO] | PF00411 | Ribosomal protein S11 (Ribosomal_S11) | Ribosomal protein S11 | - | Family |
| NB [auth PP] | PF00203 | Ribosomal protein S19 (Ribosomal_S19) | Ribosomal protein S19 | Domain | |
| OB [auth QQ] | PF00380 | Ribosomal protein S9/S16 (Ribosomal_S9) | Ribosomal protein S9/S16 | - | Family |
| QB [auth SS] | PF00416 | Ribosomal protein S13/S18 (Ribosomal_S13) | Ribosomal protein S13/S18 | - | Family |
| RB [auth TT] | PF01090 | Ribosomal protein S19e (Ribosomal_S19e) | Ribosomal protein S19e | - | Family |
| SB [auth UU] | PF00338 | Ribosomal protein S10p/S20e (Ribosomal_S10) | Ribosomal protein S10p/S20e | This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. | Domain |
| UB [auth WW] | PF00410 | Ribosomal protein S8 (Ribosomal_S8) | Ribosomal protein S8 | Domain | |
| PF01248 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae) | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Pharos: Disease Associations Pharos Homepage Annotation
| Chains | Drug Target   | Associated Disease |
|---|---|---|
| GC [auth ii] | :  Q9BRX2 | |
| HC [auth jj] | :  Q9Y450 |














