Structure of MITat 1.1
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d5ly9b_ | Coiled coil proteins | Antiparallel coiled-coil | Variant surface glycoprotein (N-terminal domain) | automated matches | automated matches | (Trypanosoma brucei brucei ) [TaxId: 5702 ], | SCOPe (2.08) |
| A | d5ly9a_ | Coiled coil proteins | Antiparallel coiled-coil | Variant surface glycoprotein (N-terminal domain) | automated matches | automated matches | (Trypanosoma brucei brucei ) [TaxId: 5702 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | NPC1_MLD | e5ly9B1 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Ferredoxin domains in multidrug efflux transporter | T: Multidrug efflux transporter AcrB pore domain | F: NPC1_MLD | ECOD (v294.1) |
| A | Trypan_glycop | e5ly9A1 | A: a/b three-layered sandwiches | X: VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor | H: VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor | T: VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor | F: Trypan_glycop | ECOD (v294.1) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR001812 | Variant surface glycoprotein, N-terminal domain | Domain | |
| IPR027446 | Variant surface glycoprotein C-terminal domain superfamily | Homologous Superfamily |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
| Chains | Resource Link | Group | Subgroup | Protein |
|---|---|---|---|---|
| mpstruc | MONOTOPIC MEMBRANE PROTEINS | Variant Surface Glycoproteins (VSG) | N-terminal domain of VSG M1.1 |














