5LJ7
Structure of Aggregatibacter actinomycetemcomitans MacB bound to ATP (P21)
External Resource: Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | MacB_PCD | e5lj7A3 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: double psi | F: MacB_PCD | ECOD (1.6) |
A | UNK_F_TYPE | e5lj7A4 | A: alpha bundles | X: Type II ABC exporter transmembrane domain fold | H: Type II ABC exporter transmembrane domain-related | T: MacB transmembrane domain | F: UNK_F_TYPE | ECOD (1.6) |
A | PRK10535 | e5lj7A2 | A: a+b two layers | X: Alpha-beta plaits | H: ferredoxin-like domain in periplasmic region of MacB (From Topology) | T: ferredoxin-like domain in periplasmic region of MacB | F: PRK10535 | ECOD (1.6) |
A | ABC_tran | e5lj7A1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ABC_tran | ECOD (1.6) |
B | MacB_PCD | e5lj7B1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: double psi | F: MacB_PCD | ECOD (1.6) |
B | UNK_F_TYPE | e5lj7B4 | A: alpha bundles | X: Type II ABC exporter transmembrane domain fold | H: Type II ABC exporter transmembrane domain-related | T: MacB transmembrane domain | F: UNK_F_TYPE | ECOD (1.6) |
B | PRK10535 | e5lj7B3 | A: a+b two layers | X: Alpha-beta plaits | H: ferredoxin-like domain in periplasmic region of MacB (From Topology) | T: ferredoxin-like domain in periplasmic region of MacB | F: PRK10535 | ECOD (1.6) |
B | ABC_tran | e5lj7B2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: ABC_tran | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF12704 | MacB-like periplasmic core domain (MacB_PCD) | MacB-like periplasmic core domain | - | Family | |
PF02687 | FtsX-like permease family (FtsX) | FtsX-like permease family | - | Family | |
PF00005 | ABC transporter (ABC_tran) | ABC transporter | ABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are comp ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR050250 | Macrolide Exporter MacB | Family | |
IPR017871 | ABC transporter-like, conserved site | Conserved Site | |
IPR017911 | MacB-like, ATP-binding domain | Domain | |
IPR003838 | ABC3 transporter permease, C-terminal | Domain | |
IPR003439 | ABC transporter-like, ATP-binding domain | Domain | |
IPR003593 | AAA+ ATPase domain | Domain | |
IPR025857 | MacB-like periplasmic core domain | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | ATP Binding Cassette (ABC) Transporters | MacB ABC tranporter with bound ATPĪ³S (P21) |