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 5LHC | pdb_00005lhc

The structure of D456A mutant of Nt.BspD6I nicking endonuclease at 0.24 nm resolution .

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyRestriction endonuclease-like 8053982 3000104 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyWinged helix DNA-binding domain 8053985 3000034 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyWinged helix DNA-binding domain 8053984 3000034 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyWinged helix DNA-binding domain 8053985 3000034 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyWinged helix DNA-binding domain 8053984 3000034 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyRestriction endonuclease-like 8053982 3000104 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BSel1e5lhcB1 A: alpha arraysX: TIM beta/alpha-barrelH: TIM barrelsT: TIM barrelsF: Sel1ECOD (v295.2)
ASel1e5lhcA1 A: alpha arraysX: TIM beta/alpha-barrelH: TIM barrelsT: TIM barrelsF: Sel1ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B1.20.1270.310 Mainly Alpha Up-down Bundle Substrate Binding Domain Of Dnak Chain:ACATH (4.3.0)
B3.40.91.50 Alpha Beta 3-Layer(aba) Sandwich Restriction Endonuclease CATH (4.3.0)
A1.20.1270.310 Mainly Alpha Up-down Bundle Substrate Binding Domain Of Dnak Chain:ACATH (4.3.0)
A3.40.91.50 Alpha Beta 3-Layer(aba) Sandwich Restriction Endonuclease CATH (4.3.0)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR018573Restriction endonuclease, type II, AlwIFamily