Structure of the bacterial sex F pilus (12.5 Angstrom rise)
External Resource: Annotation
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|
| BA [auth 2M] | TraA | e5lfb2M1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| DB [auth 4K] | TraA | e5lfb4K1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| GA [auth 3C] | TraA | e5lfb3C1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| KB [auth 5C] | TraA | e5lfb5C1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| OA [auth 3K] | TraA | e5lfb3K1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| PA [auth 3L] | TraA | e5lfb3L1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| VA [auth 4C] | TraA | e5lfb4C1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| WB [auth 5O] | TraA | e5lfb5O1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| ZA [auth 4G] | TraA | e5lfb4G1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| Z [auth 2K] | TraA | e5lfb2K1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| YA [auth 4F] | TraA | e5lfb4F1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| Y [auth 2J] | TraA | e5lfb2J1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| XA [auth 4E] | TraA | e5lfb4E1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| X [auth 2I] | TraA | e5lfb2I1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| WA [auth 4D] | TraA | e5lfb4D1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| W [auth 2H] | TraA | e5lfb2H1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| VB [auth 5N] | TraA | e5lfb5N1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| V [auth 2G] | TraA | e5lfb2G1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| UB [auth 5M] | TraA | e5lfb5M1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| UA [auth 4B] | TraA | e5lfb4B1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| U [auth 2F] | TraA | e5lfb2F1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| TB [auth 5L] | TraA | e5lfb5L1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| TA [auth 4A] | TraA | e5lfb4A1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| T [auth 2E] | TraA | e5lfb2E1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| SB [auth 5K] | TraA | e5lfb5K1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| SA [auth 3O] | TraA | e5lfb3O1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| S [auth 2D] | TraA | e5lfb2D1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| RB [auth 5J] | TraA | e5lfb5J1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| RA [auth 3N] | TraA | e5lfb3N1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| R [auth 2C] | TraA | e5lfb2C1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| QB [auth 5I] | TraA | e5lfb5I1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| QA [auth 3M] | TraA | e5lfb3M1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| Q [auth 2B] | TraA | e5lfb2B1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| PB [auth 5H] | TraA | e5lfb5H1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| P [auth 2A] | TraA | e5lfb2A1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| OB [auth 5G] | TraA | e5lfb5G1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| O [auth 1O] | TraA | e5lfb1O1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| NB [auth 5F] | TraA | e5lfb5F1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| NA [auth 3J] | TraA | e5lfb3J1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| N [auth 1N] | TraA | e5lfb1N1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| MB [auth 5E] | TraA | e5lfb5E1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| MA [auth 3I] | TraA | e5lfb3I1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| M [auth 1M] | TraA | e5lfb1M1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| LB [auth 5D] | TraA | e5lfb5D1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| LA [auth 3H] | TraA | e5lfb3H1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| L [auth 1L] | TraA | e5lfb1L1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| KA [auth 3G] | TraA | e5lfb3G1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| K [auth 1K] | TraA | e5lfb1K1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| JB [auth 5B] | TraA | e5lfb5B1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| JA [auth 3F] | TraA | e5lfb3F1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| J [auth 1J] | TraA | e5lfb1J1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| IB [auth 5A] | TraA | e5lfb5A1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| IA [auth 3E] | TraA | e5lfb3E1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| I [auth 1I] | TraA | e5lfb1I1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| HB [auth 4O] | TraA | e5lfb4O1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| HA [auth 3D] | TraA | e5lfb3D1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| H [auth 1H] | TraA | e5lfb1H1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| GB [auth 4N] | TraA | e5lfb4N1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| G [auth 1G] | TraA | e5lfb1G1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| FB [auth 4M] | TraA | e5lfb4M1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| FA [auth 3B] | TraA | e5lfb3B1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| F [auth 1F] | TraA | e5lfb1F1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| EB [auth 4L] | TraA | e5lfb4L1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| EA [auth 3A] | TraA | e5lfb3A1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| E [auth 1E] | TraA | e5lfb1E1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| DA [auth 2O] | TraA | e5lfb2O1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| D [auth 1D] | TraA | e5lfb1D1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| CB [auth 4J] | TraA | e5lfb4J1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| CA [auth 2N] | TraA | e5lfb2N1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| C [auth 1C] | TraA | e5lfb1C1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| BB [auth 4I] | TraA | e5lfb4I1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| B [auth 1B] | TraA | e5lfb1B1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| AB [auth 4H] | TraA | e5lfb4H1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| AA [auth 2L] | TraA | e5lfb2L1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| A [auth 1A] | TraA | e5lfb1A1 | A: alpha bundles | X: Pilin (From Topology) | H: Pilin (From Topology) | T: Pilin | F: TraA | ECOD (1.6) |
| Chains | Accession | Name | Description | Comments | Source |
|---|
A [auth 1A], AA [auth 2L], AB [auth 4H], B [auth 1B], BA [auth 2M], BB [auth 4I], C [auth 1C], CA [auth 2N], CB [auth 4J], D [auth 1D], DA [auth 2O], DB [auth 4K], E [auth 1E], EA [auth 3A], EB [auth 4L], F [auth 1F], FA [auth 3B], FB [auth 4M], G [auth 1G], GA [auth 3C], GB [auth 4N], H [auth 1H], HA [auth 3D], HB [auth 4O], I [auth 1I], IA [auth 3E], IB [auth 5A], J [auth 1J], JA [auth 3F], JB [auth 5B], K [auth 1K], KA [auth 3G], KB [auth 5C], L [auth 1L], LA [auth 3H], LB [auth 5D], M [auth 1M], MA [auth 3I], MB [auth 5E], N [auth 1N], NA [auth 3J], NB [auth 5F], O [auth 1O], OA [auth 3K], OB [auth 5G], P [auth 2A], PA [auth 3L], PB [auth 5H], Q [auth 2B], QA [auth 3M], QB [auth 5I], R [auth 2C], RA [auth 3N], RB [auth 5J], S [auth 2D], SA [auth 3O], SB [auth 5K], T [auth 2E], TA [auth 4A], TB [auth 5L], U [auth 2F], UA [auth 4B], UB [auth 5M], V [auth 2G], VA [auth 4C], VB [auth 5N], W [auth 2H], WA [auth 4D], WB [auth 5O], X [auth 2I], XA [auth 4E], Y [auth 2J], YA [auth 4F], Z [auth 2K], ZA [auth 4G] | PF05513 | TraA (TraA) | TraA | - | Family |
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|
A [auth 1A], AA [auth 2L], AB [auth 4H], B [auth 1B], BA [auth 2M], BB [auth 4I], C [auth 1C], CA [auth 2N], CB [auth 4J], D [auth 1D], DA [auth 2O], DB [auth 4K], E [auth 1E], EA [auth 3A], EB [auth 4L], F [auth 1F], FA [auth 3B], FB [auth 4M], G [auth 1G], GA [auth 3C], GB [auth 4N], H [auth 1H], HA [auth 3D], HB [auth 4O], I [auth 1I], IA [auth 3E], IB [auth 5A], J [auth 1J], JA [auth 3F], JB [auth 5B], K [auth 1K], KA [auth 3G], KB [auth 5C], L [auth 1L], LA [auth 3H], LB [auth 5D], M [auth 1M], MA [auth 3I], MB [auth 5E], N [auth 1N], NA [auth 3J], NB [auth 5F], O [auth 1O], OA [auth 3K], OB [auth 5G], P [auth 2A], PA [auth 3L], PB [auth 5H], Q [auth 2B], QA [auth 3M], QB [auth 5I], R [auth 2C], RA [auth 3N], RB [auth 5J], S [auth 2D], SA [auth 3O], SB [auth 5K], T [auth 2E], TA [auth 4A], TB [auth 5L], U [auth 2F], UA [auth 4B], UB [auth 5M], V [auth 2G], VA [auth 4C], VB [auth 5N], W [auth 2H], WA [auth 4D], WB [auth 5O], X [auth 2I], XA [auth 4E], Y [auth 2J], YA [auth 4F], Z [auth 2K], ZA [auth 4G] | Pilin | - | - | |
| Chains | Accession | Name | Type |
|---|
A [auth 1A], AA [auth 2L], AB [auth 4H], B [auth 1B], BA [auth 2M], BB [auth 4I], C [auth 1C], CA [auth 2N], CB [auth 4J], D [auth 1D], DA [auth 2O], DB [auth 4K], E [auth 1E], EA [auth 3A], EB [auth 4L], F [auth 1F], FA [auth 3B], FB [auth 4M], G [auth 1G], GA [auth 3C], GB [auth 4N], H [auth 1H], HA [auth 3D], HB [auth 4O], I [auth 1I], IA [auth 3E], IB [auth 5A], J [auth 1J], JA [auth 3F], JB [auth 5B], K [auth 1K], KA [auth 3G], KB [auth 5C], L [auth 1L], LA [auth 3H], LB [auth 5D], M [auth 1M], MA [auth 3I], MB [auth 5E], N [auth 1N], NA [auth 3J], NB [auth 5F], O [auth 1O], OA [auth 3K], OB [auth 5G], P [auth 2A], PA [auth 3L], PB [auth 5H], Q [auth 2B], QA [auth 3M], QB [auth 5I], R [auth 2C], RA [auth 3N], RB [auth 5J], S [auth 2D], SA [auth 3O], SB [auth 5K], T [auth 2E], TA [auth 4A], TB [auth 5L], U [auth 2F], UA [auth 4B], UB [auth 5M], V [auth 2G], VA [auth 4C], VB [auth 5N], W [auth 2H], WA [auth 4D], WB [auth 5O], X [auth 2I], XA [auth 4E], Y [auth 2J], YA [auth 4F], Z [auth 2K], ZA [auth 4G] | IPR008873 | TraA | Family |
