Annotations: 5L9W

Crystal structure of the Apc core complex

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D [auth C]	Hydantoinase_A	e5l9wC1	A: alpha arrays	X: Mog1p/PsbP-like	H: EGF-related	T: TNF receptor-like	F: Hydantoinase_A	ECOD (v295.2)
C [auth b]	Hydantoinase_A	e5l9wb1	A: alpha arrays	X: Mog1p/PsbP-like	H: EGF-related	T: TNF receptor-like	F: Hydantoinase_A	ECOD (v295.2)
C [auth b]		e5l9wb3	A: alpha arrays	X: Mog1p/PsbP-like	H: EGF-related	T: TNF receptor-like	F:	ECOD (v295.2)
C [auth b]		e5l9wb4	A: alpha arrays	X: Mog1p/PsbP-like	H: EGF-related	T: TNF receptor-like	F:	ECOD (v295.2)
C [auth b]	PEPcase	e5l9wb5	A: alpha arrays	X: Mog1p/PsbP-like	H: EGF-related	T: TNF receptor-like	F: PEPcase	ECOD (v295.2)
B	Hydantoinase_A	e5l9wB1	A: alpha arrays	X: Ribonuclease H-like	H: Ribonuclease H-like	T: Ribonuclease H-like	F: Hydantoinase_A	ECOD (v295.2)
B	Hydant_A_N	e5l9wB3	A: alpha arrays	X: Reverse ferredoxin	H: a/b domain in Acetophenone carboxylase (Apc) alpha subunit	T: a/b domain in Acetophenone carboxylase (Apc) alpha subunit	F: Hydant_A_N	ECOD (v295.2)
B	Hydant_A_C	e5l9wB4	A: alpha arrays	X: Reverse ferredoxin	H: a+b domain in Acetophenone carboxylase (Apc) alpha subunit	T: a+b domain in Acetophenone carboxylase (Apc) alpha subunit	F: Hydant_A_C	ECOD (v295.2)
B	Hydant_A_C	e5l9wB5	A: alpha arrays	X: Mog1p/PsbP-like	H: EGF-related	T: TNF receptor-like	F: Hydant_A_C	ECOD (v295.2)
A	Hydantoinase_B	e5l9wA1	A: alpha arrays	X: MocoBD/DmpA-related	H: MocoBD/DmpA-related	T: N-terminal domain of Apc beta-subunit	F: Hydantoinase_B	ECOD (v295.2)
A	Hydantoinase_B	e5l9wA2	A: alpha arrays	X: MocoBD/DmpA-related	H: MocoBD/DmpA-related	T: Apc (acetophenone carboxylase) beta subunit middle domain	F: Hydantoinase_B	ECOD (v295.2)
A	Hydantoinase_B	e5l9wA3	A: alpha arrays	X: Ribonuclease H-like	H: Ribonuclease H-like	T: Ribonuclease H-like	F: Hydantoinase_B	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
D [auth C]	PF08882	Acetone carboxylase gamma subunit (Acetone_carb_G)	Acetone carboxylase gamma subunit	Acetone carboxylase is the key enzyme of bacterial acetone metabolism, catalysing the condensation of acetone and CO(2) to form acetoacetate.	Domain
B	PF01968	Hydantoinase/oxoprolinase (Hydantoinase_A)	Hydantoinase/oxoprolinase	-	Family
B	PF19278	Hydantoinase/oxoprolinase C-terminal domain (Hydant_A_C)	Hydantoinase/oxoprolinase C-terminal domain	This domain is found at the C-terminus of acetophenone carboxylase alpha subunit [1]. According to ECOD this domain adopts a reverse ferredoxin fold. This domain is found at the C-terminus of a wide range of related enzymes subunits.	Domain
B	PF05378	Hydantoinase/oxoprolinase N-terminal region (Hydant_A_N)	Hydantoinase/oxoprolinase N-terminal region	-	Family
A	PF02538	Hydantoinase B/oxoprolinase (Hydantoinase_B)	Hydantoinase B/oxoprolinase	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
D [auth C]	Acetophenone carboxylase beta subunit	-	-	cellular anatomical structure intracellular anatomical structure cytoplasm
C [auth b]	Acetophenone carboxylase alpha subunit	hydrolase activity 5-oxoprolinase (ATP-hydrolyzing) activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides catalytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	glutathione metabolic process modified amino acid metabolic process sulfur compound metabolic process metabolic process cellular process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol
B	Acetophenone carboxylase gamma subunit	hydrolase activity 5-oxoprolinase (ATP-hydrolyzing) activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides catalytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	glutathione metabolic process modified amino acid metabolic process sulfur compound metabolic process metabolic process cellular process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol
A	Acetophenone carboxylase delta subunit	hydrolase activity 5-oxoprolinase (ATP-hydrolyzing) activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides catalytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	glutathione metabolic process modified amino acid metabolic process sulfur compound metabolic process metabolic process cellular process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
D [auth C]	IPR016750	Acetophenone carboxylase beta subunit/Acetone carboxylase gamma subunit	Family
D [auth C]	IPR050001	Acetophenone carboxylase beta subunit	Family
C [auth b]	IPR053706	Acetophenone carboxylase alpha subunit-like	Family
C [auth b]	IPR045079	Oxoprolinase-like	Family
C [auth b]	IPR002821	Hydantoinase A/oxoprolinase	Domain
C [auth b]	IPR008040	Hydantoinase/oxoprolinase, N-terminal	Domain
B	IPR045079	Oxoprolinase-like	Family
B	IPR049517	Acetophenone carboxylase-like, C-terminal domain	Domain
B	IPR002821	Hydantoinase A/oxoprolinase	Domain
B	IPR050000	Acetophenone carboxylase gamma subunit	Family
B	IPR008040	Hydantoinase/oxoprolinase, N-terminal	Domain
A	IPR045079	Oxoprolinase-like	Family
A	IPR049999	Acetophenone carboxylase delta subunit	Family
A	IPR003692	Hydantoinase B/oxoprolinase	Domain