5L2Z | pdb_00005l2z

Factor VIIa in complex with the inhibitor 1-[(2R,15R)-2-[(1-amino-4-fluoroisoquinolin-6-yl)amino]-4,15,17-trimethyl-3,12-dioxo-13-oxa-4,11-diazatricyclo[14.2.2.1~6,10~]henicosa-1(18),6(21),7,9,16,19-hexaen-7-yl]cyclohexane-1-carboxylic acid

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
B [auth L]d5l2zl_ Small proteins Knottins (small inhibitors, toxins, lectins) EGF/Laminin EGF-type module Coagulation factor VIIa Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
A [auth H]d5l2zh_ All beta proteins Trypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases Coagulation factor VIIa Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
B [auth L]SCOP2B SuperfamilyEGF/Laminin-like 8039297 3000412 SCOP2B (2022-06-29)
A [auth H]SCOP2B SuperfamilyTrypsin-like serine proteases 8003776 3000114 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth L]e5l2zL1 A: cradle loop barrelX: RIFT-relatedH: Alanine racemase-CT: GTP_EFTU_D2F:ECOD (20:10:01)
A [auth H]e5l2zH1 A: cradle loop barrelX: RIFT-relatedH: Alanine racemase-CT: GTP_EFTU_D2F:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B [auth L]2.10.25.10 Mainly Beta Ribbon Laminin LamininCATH (4.3.0)
A [auth H]2.40.10.10 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteasesCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B [auth L]PF14670Coagulation Factor Xa inhibitory site (FXa_inhibition)Coagulation Factor Xa inhibitory siteThis short domain on coagulation enzyme factor Xa is found to be the target for a potent inhibitor of coagulation, TAK-442 [1]. Domain
A [auth H]PF00089Trypsin (Trypsin)TrypsinDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth L]Coagulation factor VII (Light Chain)
A [auth H]Coagulation factor VII (Heavy Chain)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth L]IPR018097EGF-like calcium-binding, conserved siteConserved Site
B [auth L]IPR018114Serine proteases, trypsin family, histidine active siteActive Site
B [auth L]IPR009003Peptidase S1, PA clanHomologous Superfamily
B [auth L]IPR033116Serine proteases, trypsin family, serine active siteActive Site
B [auth L]IPR001254Serine proteases, trypsin domainDomain
B [auth L]IPR035972Gamma-carboxyglutamic acid-rich (GLA) domain superfamilyHomologous Superfamily
B [auth L]IPR001881EGF-like calcium-binding domainDomain
B [auth L]IPR012224Peptidase S1A, coagulation factor VII/IX/X/C/ZFamily
B [auth L]IPR000294Gamma-carboxyglutamic acid-rich (GLA) domainDomain
B [auth L]IPR000742EGF-like domainDomain
B [auth L]IPR043504Peptidase_S1_PA_chymotrypsinUnknown
B [auth L]IPR050442Peptidase S1 family, coagulation factorsFamily
B [auth L]IPR017857Coagulation factor-like, Gla domain superfamilyHomologous Superfamily
B [auth L]IPR001314Peptidase S1A, chymotrypsin familyFamily
B [auth L]IPR000152EGF-type aspartate/asparagine hydroxylation sitePTM
A [auth H]IPR018097EGF-like calcium-binding, conserved siteConserved Site
A [auth H]IPR018114Serine proteases, trypsin family, histidine active siteActive Site
A [auth H]IPR009003Peptidase S1, PA clanHomologous Superfamily
A [auth H]IPR033116Serine proteases, trypsin family, serine active siteActive Site
A [auth H]IPR001254Serine proteases, trypsin domainDomain
A [auth H]IPR035972Gamma-carboxyglutamic acid-rich (GLA) domain superfamilyHomologous Superfamily
A [auth H]IPR001881EGF-like calcium-binding domainDomain
A [auth H]IPR012224Peptidase S1A, coagulation factor VII/IX/X/C/ZFamily
A [auth H]IPR000294Gamma-carboxyglutamic acid-rich (GLA) domainDomain
A [auth H]IPR000742EGF-like domainDomain
A [auth H]IPR043504Peptidase_S1_PA_chymotrypsinUnknown
A [auth H]IPR050442Peptidase S1 family, coagulation factorsFamily
A [auth H]IPR017857Coagulation factor-like, Gla domain superfamilyHomologous Superfamily
A [auth H]IPR001314Peptidase S1A, chymotrypsin familyFamily
A [auth H]IPR000152EGF-type aspartate/asparagine hydroxylation sitePTM

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
B [auth L]Pharos:  P08709
A [auth H]Pharos:  P08709