5L2F | pdb_00005l2f

High Resolution Structure of Acinetobacter baumannii beta-lactamase OXA-51 I129L/K83D bound to doripenem

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Dd5l2fd_ Multi-domain proteins (alpha and beta) beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like automated matches automated matches (Acinetobacter baumannii ) [TaxId: 470 ], SCOPe (2.08)
Cd5l2fc_ Multi-domain proteins (alpha and beta) beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like automated matches automated matches (Acinetobacter baumannii ) [TaxId: 470 ], SCOPe (2.08)
Bd5l2fb_ Multi-domain proteins (alpha and beta) beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like automated matches automated matches (Acinetobacter baumannii ) [TaxId: 470 ], SCOPe (2.08)
Ad5l2fa_ Multi-domain proteins (alpha and beta) beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like automated matches automated matches (Acinetobacter baumannii ) [TaxId: 470 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B Superfamilybeta-lactamase/transpeptidase-like 8074325 3001604 SCOP2B (2022-06-29)
CSCOP2B Superfamilybeta-lactamase/transpeptidase-like 8074325 3001604 SCOP2B (2022-06-29)
BSCOP2B Superfamilybeta-lactamase/transpeptidase-like 8074325 3001604 SCOP2B (2022-06-29)
ASCOP2B Superfamilybeta-lactamase/transpeptidase-like 8074325 3001604 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DPPP2R1A-like_HEAT, VPS15-like_hele5l2fD1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PPP2R1A-like_HEAT, VPS15-like_helECOD (develop294)
CPPP2R1A-like_HEAT, VPS15-like_hele5l2fC1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PPP2R1A-like_HEAT, VPS15-like_helECOD (develop294)
BPPP2R1A-like_HEAT, VPS15-like_hele5l2fB1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PPP2R1A-like_HEAT, VPS15-like_helECOD (develop294)
APPP2R1A-like_HEAT, VPS15-like_hele5l2fA1 A: alpha bundlesX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PPP2R1A-like_HEAT, VPS15-like_helECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D3.40.710.10 Alpha Beta 3-Layer(aba) Sandwich Beta-lactamase DD-peptidase/beta-lactamase superfamilyCATH (4.3.0)
C3.40.710.10 Alpha Beta 3-Layer(aba) Sandwich Beta-lactamase DD-peptidase/beta-lactamase superfamilyCATH (4.3.0)
B3.40.710.10 Alpha Beta 3-Layer(aba) Sandwich Beta-lactamase DD-peptidase/beta-lactamase superfamilyCATH (4.3.0)
A3.40.710.10 Alpha Beta 3-Layer(aba) Sandwich Beta-lactamase DD-peptidase/beta-lactamase superfamilyCATH (4.3.0)

AMR Gene Family: CARD Annotation CARD Database Homepage

ChainsAccessionGene FamilyDrug Class Resistance MachanismProvenance Source (Version)
A, B, C, D
ARO:3007725OXA-51-like beta-lactamasemonobactam, carbapenem, penicillin beta-lactamantibiotic inactivationCARD (4.0.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Beta-lactamase - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR012338Beta-lactamase/transpeptidase-likeHomologous Superfamily
A, B, C, D
IPR001460Penicillin-binding protein, transpeptidaseDomain