5L1P | pdb_00005l1p

X-ray Structure of Cytochrome P450 PntM with Pentalenolactone

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d5l1pa_	All alpha proteins	Cytochrome P450	Cytochrome P450	automated matches	automated matches	(Streptomyces arenae ) [TaxId: 29301 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Cytochrome P450	8076873	3001061	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PK_Tyr_Ser-Thr	e5l1pA1	A: alpha bundles	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: PK_Tyr_Ser-Thr	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.630.10	Mainly Alpha	Orthogonal Bundle	Cytochrome p450	Cytochrome P450	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Pentalenolactone synthase	monooxygenase activity oxidoreductase activity catalytic activity oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen binding tetrapyrrole binding heme binding cation binding transition metal ion binding iron ion binding ion binding metal ion binding small molecule binding oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor monooxygenase activity oxidoreductase activity catalytic activity oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen binding tetrapyrrole binding heme binding cation binding transition metal ion binding iron ion binding ion binding metal ion binding small molecule binding oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor oxidoreductase activity, acting on the CH-CH group of donors	oxoacid metabolic process lipid biosynthetic process epoxide metabolic process terpenoid biosynthetic process organic acid biosynthetic process organic acid metabolic process carboxylic acid biosynthetic process ether biosynthetic process lactone biosynthetic process small molecule metabolic process sesquiterpenoid biosynthetic process pentalenolactone biosynthetic process monocarboxylic acid biosynthetic process isoprenoid biosynthetic process oxoacid metabolic process lipid biosynthetic process epoxide metabolic process terpenoid biosynthetic process organic acid biosynthetic process organic acid metabolic process carboxylic acid biosynthetic process ether biosynthetic process lactone biosynthetic process small molecule metabolic process sesquiterpenoid biosynthetic process pentalenolactone biosynthetic process monocarboxylic acid biosynthetic process isoprenoid biosynthetic process small molecule biosynthetic process sesquiterpenoid metabolic process carboxylic acid metabolic process primary metabolic process biosynthetic process lactone metabolic process metabolic process cellular process monocarboxylic acid metabolic process terpenoid metabolic process isoprenoid metabolic process lipid metabolic process antibiotic metabolic process antibiotic biosynthetic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR017972	Cytochrome P450, conserved site	Conserved Site
A	IPR001128	Cytochrome P450	Family
A	IPR054976	Pentalenolactone synthase	Family
A	IPR002397	Cytochrome P450, B-class	Family
A	IPR036396	Cytochrome P450 superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.