Structure of the 2.65 Angstrom P2(1) crystal of K. pneumonia MrkH
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| D [auth C] | SCOP2B Superfamily | PilZ domain-like | 8091591 | 3000480 | SCOP2B (2022-06-29) |
| D [auth C] | SCOP2B Superfamily | PilZ domain-like | 8091590 | 3000480 | SCOP2B (2022-06-29) |
| C [auth B] | SCOP2B Superfamily | PilZ domain-like | 8091590 | 3000480 | SCOP2B (2022-06-29) |
| C [auth B] | SCOP2B Superfamily | PilZ domain-like | 8091591 | 3000480 | SCOP2B (2022-06-29) |
| B [auth A] | SCOP2B Superfamily | PilZ domain-like | 8091590 | 3000480 | SCOP2B (2022-06-29) |
| B [auth A] | SCOP2B Superfamily | PilZ domain-like | 8091591 | 3000480 | SCOP2B (2022-06-29) |
| A [auth D] | SCOP2B Superfamily | PilZ domain-like | 8091590 | 3000480 | SCOP2B (2022-06-29) |
| A [auth D] | SCOP2B Superfamily | PilZ domain-like | 8091591 | 3000480 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D [auth C] | PilZ | e5kedC2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: PilZ | ECOD (1.6) |
| D [auth C] | YcgR_like | e5kedC1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: YcgR_like | ECOD (1.6) |
| C [auth B] | PilZ | e5kedB2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: PilZ | ECOD (1.6) |
| C [auth B] | YcgR_like | e5kedB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: YcgR_like | ECOD (1.6) |
| B [auth A] | PilZ | e5kedA2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: PilZ | ECOD (1.6) |
| B [auth A] | YcgR_like | e5kedA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: YcgR_like | ECOD (1.6) |
| A [auth D] | PilZ | e5kedD1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: PilZ | ECOD (1.6) |
| A [auth D] | YcgR_like | e5kedD2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: YcgR_like | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| D [auth C] | 2.40.10.220 | Mainly Beta | Beta Barrel | Thrombin, subunit H | predicted glycosyltransferase like domains | CATH (4.3.0) |
| C [auth B] | 2.40.10.220 | Mainly Beta | Beta Barrel | Thrombin, subunit H | predicted glycosyltransferase like domains | CATH (4.3.0) |
| B [auth A] | 2.40.10.220 | Mainly Beta | Beta Barrel | Thrombin, subunit H | predicted glycosyltransferase like domains | CATH (4.3.0) |
| A [auth D] | 2.40.10.220 | Mainly Beta | Beta Barrel | Thrombin, subunit H | predicted glycosyltransferase like domains | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| A [auth D], B [auth A], C [auth B], D [auth C] | Flagellar brake protein YcgR | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| A [auth D], B [auth A], C [auth B], D [auth C] | IPR054375 | MrkH-like, YcgR-like domain | Domain |
