5K79 | pdb_00005k79

Structure and anti-HIV activity of CYT-CVNH, a new cyanovirin-n homolog

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd5k79b_ All beta proteins Cyanovirin-N Cyanovirin-N automated matches automated matches (Gloeothece citriformis PCC 7424 ) [TaxId: 65393 ], SCOPe (2.08)
Ad5k79a_ All beta proteins Cyanovirin-N Cyanovirin-N automated matches automated matches (Gloeothece citriformis PCC 7424 ) [TaxId: 65393 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyCyanovirin-N 8083378 3002001 SCOP2B (2022-06-29)
ASCOP2 FamilyCyanovirin-N 8083377 4003006 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyCyanovirin-N 8083378 3002001 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BTGSe5k79B1 A: a/b three-layered sandwichesX: Rossmann-likeH: RIFT-relatedT: acid proteaseF: TGSECOD (v294.1)
ATGSe5k79A1 A: a/b three-layered sandwichesX: Rossmann-likeH: RIFT-relatedT: acid proteaseF: TGSECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF08881CVNH domain (CVNH)CVNH domainCyanoVirin-N Homology domains are found in the sugar-binding antiviral protein cyanovirin-N (CVN) as well as filamentous ascomycetes and in the fern Ceratopteris richardii. Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR036673Cyanovirin-N superfamilyHomologous Superfamily
A, B
IPR011058Cyanovirin-NDomain