5JZT
Cryo-EM structure of aerolysin pore in LMNG micelle
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Aerolisin/ETX/LSL pore-forming domain-like | 8035143 | 3000278 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | C-type lectin-like | 8035141 | 3001261 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | C-type lectin-like | 8035141 | 3001261 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Aerolisin/ETX/LSL pore-forming domain-like | 8035143 | 3000278 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Aerolisin/ETX/LSL pore-forming domain-like | 8035143 | 3000278 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | C-type lectin-like | 8035141 | 3001261 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Aerolisin/ETX/LSL pore-forming domain-like | 8035143 | 3000278 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | C-type lectin-like | 8035141 | 3001261 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Aerolisin/ETX/LSL pore-forming domain-like | 8035143 | 3000278 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | C-type lectin-like | 8035141 | 3001261 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | C-type lectin-like | 8035141 | 3001261 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Aerolisin/ETX/LSL pore-forming domain-like | 8035143 | 3000278 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | C-type lectin-like | 8035141 | 3001261 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Aerolisin/ETX/LSL pore-forming domain-like | 8035143 | 3000278 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01117 | e5jztA1 | A: beta complex topology | X: Aerolysin family of pore-forming toxins (From Topology) | H: Aerolysin family of pore-forming toxins (From Topology) | T: Aerolysin family of pore-forming toxins | F: PF01117 | ECOD (1.6) |
A | PF03440 | e5jztA2 | A: a+b complex topology | X: C-type lectin-like (From Homology) | H: C-type lectin-like | T: C-type lectin-like | F: PF03440 | ECOD (1.6) |
B | PF01117 | e5jztB2 | A: beta complex topology | X: Aerolysin family of pore-forming toxins (From Topology) | H: Aerolysin family of pore-forming toxins (From Topology) | T: Aerolysin family of pore-forming toxins | F: PF01117 | ECOD (1.6) |
B | PF03440 | e5jztB1 | A: a+b complex topology | X: C-type lectin-like (From Homology) | H: C-type lectin-like | T: C-type lectin-like | F: PF03440 | ECOD (1.6) |
F | PF01117 | e5jztF1 | A: beta complex topology | X: Aerolysin family of pore-forming toxins (From Topology) | H: Aerolysin family of pore-forming toxins (From Topology) | T: Aerolysin family of pore-forming toxins | F: PF01117 | ECOD (1.6) |
F | PF03440 | e5jztF2 | A: a+b complex topology | X: C-type lectin-like (From Homology) | H: C-type lectin-like | T: C-type lectin-like | F: PF03440 | ECOD (1.6) |
G | PF01117 | e5jztG2 | A: beta complex topology | X: Aerolysin family of pore-forming toxins (From Topology) | H: Aerolysin family of pore-forming toxins (From Topology) | T: Aerolysin family of pore-forming toxins | F: PF01117 | ECOD (1.6) |
G | PF03440 | e5jztG1 | A: a+b complex topology | X: C-type lectin-like (From Homology) | H: C-type lectin-like | T: C-type lectin-like | F: PF03440 | ECOD (1.6) |
C | PF01117 | e5jztC1 | A: beta complex topology | X: Aerolysin family of pore-forming toxins (From Topology) | H: Aerolysin family of pore-forming toxins (From Topology) | T: Aerolysin family of pore-forming toxins | F: PF01117 | ECOD (1.6) |
C | PF03440 | e5jztC2 | A: a+b complex topology | X: C-type lectin-like (From Homology) | H: C-type lectin-like | T: C-type lectin-like | F: PF03440 | ECOD (1.6) |
D | PF01117 | e5jztD2 | A: beta complex topology | X: Aerolysin family of pore-forming toxins (From Topology) | H: Aerolysin family of pore-forming toxins (From Topology) | T: Aerolysin family of pore-forming toxins | F: PF01117 | ECOD (1.6) |
D | PF03440 | e5jztD1 | A: a+b complex topology | X: C-type lectin-like (From Homology) | H: C-type lectin-like | T: C-type lectin-like | F: PF03440 | ECOD (1.6) |
E | PF01117 | e5jztE1 | A: beta complex topology | X: Aerolysin family of pore-forming toxins (From Topology) | H: Aerolysin family of pore-forming toxins (From Topology) | T: Aerolysin family of pore-forming toxins | F: PF01117 | ECOD (1.6) |
E | PF03440 | e5jztE2 | A: a+b complex topology | X: C-type lectin-like (From Homology) | H: C-type lectin-like | T: C-type lectin-like | F: PF03440 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01117 | Aerolysin toxin (Aerolysin) | Aerolysin toxin | This family represents the pore forming lobe of aerolysin. | Domain | |
PF03440 | Aerolysin/Pertussis toxin (APT) domain (APT) | Aerolysin/Pertussis toxin (APT) domain | This family represents the N-terminal domain of aerolysin and pertussis toxin and has a type-C lectin like fold. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Aerolysin | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR005831 | Aerolysin/haemolysin toxin, conserved site | Conserved Site | |
IPR005830 | Aerolysin | Family | |
IPR005138 | Aerolysin/Pertussis toxin domain | Domain | |
IPR016187 | C-type lectin fold | Homologous Superfamily | |
IPR037015 | Aerolysin/Pertussis toxin (APT), N-terminal domain superfamily | Homologous Superfamily |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Beta-barrel transmembrane | Pore-forming beta-sheet toxins | Aerolysin (n=14,S=14 or n=16,S=16) |