5JZM | pdb_00005jzm

Structure of wild type Amidase from Vibrio cholerae 0395 at low temparature at 1.8 Angstroms resolution.

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
F	SCOP2B Superfamily	Class I glutamine amidotransferase-like	8079930	3001405	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Class I glutamine amidotransferase-like	8079930	3001405	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Class I glutamine amidotransferase-like	8079930	3001405	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Class I glutamine amidotransferase-like	8079930	3001405	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Class I glutamine amidotransferase-like	8079930	3001405	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Class I glutamine amidotransferase-like	8079930	3001405	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F	RRM_1	e5jzmF1	A: alpha arrays	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: RRM_1	ECOD (v295.2)
E	RRM_1	e5jzmE1	A: alpha arrays	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: RRM_1	ECOD (v295.2)
D	RRM_1	e5jzmD1	A: alpha arrays	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: RRM_1	ECOD (v295.2)
C	RRM_1	e5jzmC1	A: alpha arrays	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: RRM_1	ECOD (v295.2)
B	RRM_1	e5jzmB1	A: alpha arrays	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: RRM_1	ECOD (v295.2)
A	RRM_1	e5jzmA1	A: alpha arrays	X: beta-propeller-like	H: beta-propeller	T: 9-bladed	F: RRM_1	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
F	3.40.50.880	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Class I glutamine amidotransferase (GATase) domain	CATH (4.3.0)
E	3.40.50.880	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Class I glutamine amidotransferase (GATase) domain	CATH (4.3.0)
D	3.40.50.880	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Class I glutamine amidotransferase (GATase) domain	CATH (4.3.0)
C	3.40.50.880	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Class I glutamine amidotransferase (GATase) domain	CATH (4.3.0)
B	3.40.50.880	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Class I glutamine amidotransferase (GATase) domain	CATH (4.3.0)
A	3.40.50.880	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Class I glutamine amidotransferase (GATase) domain	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	Intracellular protease/amidase	hydro-lyase activity lyase activity catalytic activity glyoxalase III activity carbon-oxygen lyase activity catalytic activity, acting on a protein protein deglycase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides hydrolase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	-	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR029062	Class I glutamine amidotransferase-like	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR050325	Protein/nucleic acid deglycase-like	Family
A, B, C, D, E A, B, C, D, E, F	IPR017283	Protein/nucleic acid deglycase HchA	Family
A, B, C, D, E A, B, C, D, E, F	IPR002818	DJ-1/PfpI-like	Domain