5JRL | pdb_00005jrl

Crystal Structure of the Sphingopyxin I Lasso Peptide Isopeptidase SpI-IsoP (Native)


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
De5jrlD1 A: a/b three-layered sandwichesX: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4H: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4T: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4F:ECOD (v294.1)
DRibosomal_L27Ae5jrlD2 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: Ribosomal_L27AECOD (v294.1)
CSPRYe5jrlC1 A: a/b three-layered sandwichesX: Type II ABC importer transmembrane domain foldH: Type II ABC importer transmembrane domain foldT: Type II ABC importer transmembrane domain foldF: SPRYECOD (v294.1)
CRibosomal_L27Ae5jrlC2 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: Ribosomal_L27AECOD (v294.1)
BPK_Tyr_Ser-Thre5jrlB1 A: a/b three-layered sandwichesX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PK_Tyr_Ser-ThrECOD (v294.1)
Aeuk_SelB_IIIe5jrlA1 A: a/b three-layered sandwichesX: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4H: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4T: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4F: euk_SelB_IIIECOD (v294.1)
ARibosomal_L27Ae5jrlA2 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: Ribosomal_L27AECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF00326Prolyl oligopeptidase family (Peptidase_S9)Prolyl oligopeptidase familyDomain

InterPro: Protein Family Classification InterPro Database Homepage