5JM0 | pdb_00005jm0

Structure of the S. cerevisiae alpha-mannosidase 1

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Ae5jm0A1 A: a/b three-layered sandwichesX: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4H: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4T: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4F:ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF01074Glycosyl hydrolases family 38 N-terminal domain (Glyco_hydro_38N)Glycosyl hydrolases family 38 N-terminal domainGlycosyl hydrolases are key enzymes of carbohydrate metabolism. Domain
PF22907Alpha-mannosidase, jelly roll domain (Ams1-like_1st)Alpha-mannosidase, jelly roll domainThis domain is found at the N-terminal end of Alpha-mannosidase 2C1 from Schizosaccharomyces pombe (Ams1) and similar sequences mainly from eukaryota and some species from actinomycetes. Ams1 hydrolyse terminal alpha-linked mannoses in free oligosacc ...This domain is found at the N-terminal end of Alpha-mannosidase 2C1 from Schizosaccharomyces pombe (Ams1) and similar sequences mainly from eukaryota and some species from actinomycetes. Ams1 hydrolyse terminal alpha-linked mannoses in free oligosaccharides released from misfolded glycoproteins or lipid-linked oligosaccharide donors. This entry represents the jelly-roll domain [2].
Domain
PF17677Glycosyl hydrolases family 38 C-terminal beta sandwich domain (Glyco_hydro38C2)Glycosyl hydrolases family 38 C-terminal beta sandwich domainThis domain is found at the C-terminal end of various glycosyl hydrolases belonging to family 38. The domain has a beta sandwich fold. Domain
PF09261Alpha mannosidase middle domain (Alpha-mann_mid)Alpha mannosidase middle domainMembers of this family adopt a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold. They are predominantly found in the enzyme alpha-mannosidase [1]. Domain
PF07748Glycosyl hydrolases family 38 C-terminal domain (Glyco_hydro_38C)Glycosyl hydrolases family 38 C-terminal domainGlycosyl hydrolases are key enzymes of carbohydrate metabolism. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Alpha-mannosidase,Alpha-mannosidase,Alpha-mannosidase

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR028995Glycoside hydrolase families 57/38, central domain superfamilyHomologous Superfamily
IPR015341Glycoside hydrolase family 38, central domainDomain
IPR011330Glycoside hydrolase/deacetylase, beta/alpha-barrelHomologous Superfamily
IPR054723Alpha-mannosidase Ams1-like, N-terminalDomain
IPR011682Glycosyl hydrolase family 38, C-terminalDomain
IPR041147Glycosyl hydrolases family 38, C-terminal domainDomain
IPR000602Glycoside hydrolase family 38, N-terminal domainDomain
IPR027291Glycoside hydrolase 38, N-terminal domain superfamilyHomologous Superfamily
IPR011013Galactose mutarotase-like domain superfamilyHomologous Superfamily
IPR037094Glycoside hydrolase family 38, central domain superfamilyHomologous Superfamily