5J6R | pdb_00005j6r

Crystal structure of Human Papillomavirus Type 59 L1 pentamer


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
JSCOP2B SuperfamilyGroup I dsDNA viruses 8071422 3000939 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyGroup I dsDNA viruses 8071422 3000939 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyGroup I dsDNA viruses 8071422 3000939 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyGroup I dsDNA viruses 8071422 3000939 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyGroup I dsDNA viruses 8071422 3000939 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyGroup I dsDNA viruses 8071422 3000939 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyGroup I dsDNA viruses 8071422 3000939 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyGroup I dsDNA viruses 8071422 3000939 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGroup I dsDNA viruses 8071422 3000939 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyGroup I dsDNA viruses 8071422 3000939 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
JANAPC1e5j6rJ1 A: a/b three-layered sandwichesX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF: ANAPC1ECOD (v294.1)
IANAPC1e5j6rI1 A: a/b three-layered sandwichesX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF: ANAPC1ECOD (v294.1)
HANAPC1e5j6rH1 A: a/b three-layered sandwichesX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF: ANAPC1ECOD (v294.1)
GANAPC1e5j6rG1 A: a/b three-layered sandwichesX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF: ANAPC1ECOD (v294.1)
FANAPC1e5j6rF1 A: a/b three-layered sandwichesX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF: ANAPC1ECOD (v294.1)
EANAPC1e5j6rE1 A: a/b three-layered sandwichesX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF: ANAPC1ECOD (v294.1)
DANAPC1e5j6rD1 A: a/b three-layered sandwichesX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF: ANAPC1ECOD (v294.1)
CANAPC1e5j6rC1 A: a/b three-layered sandwichesX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF: ANAPC1ECOD (v294.1)
BANAPC1e5j6rB1 A: a/b three-layered sandwichesX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF: ANAPC1ECOD (v294.1)
AANAPC1e5j6rA1 A: a/b three-layered sandwichesX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF: ANAPC1ECOD (v294.1)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR036973Major capsid L1 (late) superfamily, PapillomavirusHomologous Superfamily
A, B, C, D, E
IPR011222Double-stranded DNA virus, group I, capsidHomologous Superfamily
A, B, C, D, E
IPR002210Major capsid L1 (late) protein, PapillomavirusFamily