5J67
Structure of Astrotactin-2, a conserved vertebrate-specific and perforin-like membrane protein involved in neuronal development
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | MAC/CDC-like | 8052036 | 3002081 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Fibronectin type III | 8052092 | 3002063 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | EGF/Laminin-like | 8052090 | 3000412 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Annexin | 8052096 | 3000627 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Fibronectin type III | 8052092 | 3002063 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Annexin | 8052096 | 3000627 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | MAC/CDC-like | 8052036 | 3002081 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | EGF/Laminin-like | 8052090 | 3000412 | SCOP2B (2022-06-29) |
C | SCOP2 Family | ASTN-2 EGF-like domain | 8052089 | 4007581 | SCOP2 (2022-06-29) |
C | SCOP2 Family | ASTN-2 fibronectin type III domain | 8052091 | 4007582 | SCOP2 (2022-06-29) |
C | SCOP2 Family | MACPF-like | 8049570 | 4006548 | SCOP2 (2022-06-29) |
C | SCOP2 Family | ASTN-2 annexin-like domain | 8052094 | 4007583 | SCOP2 (2022-06-29) |
C | SCOP2 Superfamily | EGF/Laminin-like | 8052090 | 3000412 | SCOP2 (2022-06-29) |
C | SCOP2 Superfamily | Fibronectin type III | 8052092 | 3002063 | SCOP2 (2022-06-29) |
C | SCOP2 Superfamily | MAC/CDC-like | 8052036 | 3002081 | SCOP2 (2022-06-29) |
C | SCOP2 Superfamily | Annexin | 8052096 | 3000627 | SCOP2 (2022-06-29) |
D | SCOP2B Superfamily | EGF/Laminin-like | 8052090 | 3000412 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Fibronectin type III | 8052092 | 3002063 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Annexin | 8052096 | 3000627 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | MAC/CDC-like | 8052036 | 3002081 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF18577 | e5j67A2 | A: beta meanders | X: C-terminal beta-hairpin in astrotactin-2 (From Topology) | H: C-terminal beta-hairpin in astrotactin-2 (From Topology) | T: C-terminal beta-hairpin in astrotactin-2 | F: PF18577 | ECOD (1.6) |
A | PF19743 | e5j67A3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF19743 | ECOD (1.6) |
A | PF01823 | e5j67A4 | A: beta complex topology | X: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology) | H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology) | T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains | F: PF01823 | ECOD (1.6) |
A | PF18411 | e5j67A5 | A: alpha arrays | X: Annexin (From Topology) | H: Annexin (From Topology) | T: Annexin | F: PF18411 | ECOD (1.6) |
A | F_UNCLASSIFIED | e5j67A1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF18577 | e5j67B5 | A: beta meanders | X: C-terminal beta-hairpin in astrotactin-2 (From Topology) | H: C-terminal beta-hairpin in astrotactin-2 (From Topology) | T: C-terminal beta-hairpin in astrotactin-2 | F: PF18577 | ECOD (1.6) |
B | PF19743 | e5j67B1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF19743 | ECOD (1.6) |
B | PF01823 | e5j67B3 | A: beta complex topology | X: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology) | H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology) | T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains | F: PF01823 | ECOD (1.6) |
B | PF18411 | e5j67B4 | A: alpha arrays | X: Annexin (From Topology) | H: Annexin (From Topology) | T: Annexin | F: PF18411 | ECOD (1.6) |
B | F_UNCLASSIFIED | e5j67B2 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: F_UNCLASSIFIED | ECOD (1.6) |
C | PF18577 | e5j67C5 | A: beta meanders | X: C-terminal beta-hairpin in astrotactin-2 (From Topology) | H: C-terminal beta-hairpin in astrotactin-2 (From Topology) | T: C-terminal beta-hairpin in astrotactin-2 | F: PF18577 | ECOD (1.6) |
C | PF19743 | e5j67C3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF19743 | ECOD (1.6) |
C | PF01823 | e5j67C1 | A: beta complex topology | X: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology) | H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology) | T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains | F: PF01823 | ECOD (1.6) |
C | PF18411 | e5j67C4 | A: alpha arrays | X: Annexin (From Topology) | H: Annexin (From Topology) | T: Annexin | F: PF18411 | ECOD (1.6) |
C | F_UNCLASSIFIED | e5j67C2 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: F_UNCLASSIFIED | ECOD (1.6) |
D | PF18577 | e5j67D2 | A: beta meanders | X: C-terminal beta-hairpin in astrotactin-2 (From Topology) | H: C-terminal beta-hairpin in astrotactin-2 (From Topology) | T: C-terminal beta-hairpin in astrotactin-2 | F: PF18577 | ECOD (1.6) |
D | PF19743 | e5j67D1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF19743 | ECOD (1.6) |
D | PF01823 | e5j67D5 | A: beta complex topology | X: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology) | H: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains (From Topology) | T: Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains | F: PF01823 | ECOD (1.6) |
D | PF18411 | e5j67D3 | A: alpha arrays | X: Annexin (From Topology) | H: Annexin (From Topology) | T: Annexin | F: PF18411 | ECOD (1.6) |
D | F_UNCLASSIFIED | e5j67D4 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: F_UNCLASSIFIED | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01823 | MAC/Perforin domain (MACPF) | MAC/Perforin domain | The membrane-attack complex (MAC) of the complement system forms transmembrane channels. These channels disrupt the phospholipid bilayer of target cells, leading to cell lysis and death. A number of proteins participate in the assembly of the MAC. Fr ... | Domain | |
PF18411 | Annexin-like domain (Annexin_2) | Annexin-like domain | This annexin-like domain can be found in astrotactin 2 (Astn-2), an integral membrane perforin-like protein linked to the planar cell polarity pathway in hair cells. The annexin-like domain is closest in fold to repeat three of human annexin V and si ... | Domain | |
PF18577 | Astrotactin-2 C-terminal beta-hairpin domain (ASTN_2_hairpin) | Astrotactin-2 C-terminal beta-hairpin domain | This is a beta-hairpin domain found at the C-terminal region of astrotactin 2 proteins (ASTN-2). ASTN-2 is an integral membrane perforin-like protein linked to the planar cell polarity pathway in hair cells. it consists of multiple polypeptide folds: ... | Domain | |
PF19743 | ASTN1/2 Fn3 domain (ASTN1_2_fn3) | ASTN1/2 Fn3 domain | Astrotactin-1 and 2 (ASTN1/2) are integral membrane proteins with a large C-terminal domain, extracellular for ASTN1 and endosome luminal for ASTN-2 [1,2]. They play critical roles in neurodevelopment, and ASTN-2 is also involved in the planar cell p ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR020864 | Membrane attack complex component/perforin (MACPF) domain | Domain | |
IPR045575 | Astrotactin-1/2, N-terminal | Domain | |
IPR040510 | Astrotactin-2, C-terminal beta-hairpin domain | Domain | |
IPR045574 | Astrotactin-1/2, Fn3 domain | Domain | |
IPR026995 | Astrotactin | Family | |
IPR040685 | Annexin-like domain | Domain | |
IPR036116 | Fibronectin type III superfamily | Homologous Superfamily |