5IUC | pdb_00005iuc

Crystal structure of the GspB siglec domain with sialyl T antigen bound

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AAsp_Arg_Hydroxe5iucA1 A: a/b three-layered sandwichesX: jelly-rollH: Double-stranded beta-helixT: Double-stranded beta-helixF: Asp_Arg_HydroxECOD (v294.1)
BAsp_Arg_Hydroxe5iucB1 A: a/b three-layered sandwichesX: jelly-rollH: Double-stranded beta-helixT: Double-stranded beta-helixF: Asp_Arg_HydroxECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.40.4140 Mainly Beta Sandwich Immunoglobulin-like CATH (4.3.0)
B2.60.40.4140 Mainly Beta Sandwich Immunoglobulin-like CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Platelet binding protein GspB- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR026465Serine-rich repeat adhesion glycoprotein, N-terminal domainDomain
A, B
IPR022263KxYKxGKxW signal peptideConserved Site
A, B
IPR044024Atypical Rib domainDomain
A, B
IPR050252Beta/Gamma-CrystallinFamily
A, B
IPR019931LPXTG cell wall anchor motifConserved Site