5IP3 | pdb_00005ip3

Tomato spotted wilt tospovirus nucleocapsid protein-ssDNA complex

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth A]SCOP2B SuperfamilyPepMV Coat protein-like 8089914 3002401 SCOP2B (2022-06-29)
B [auth C]SCOP2B SuperfamilyPepMV Coat protein-like 8089914 3002401 SCOP2B (2022-06-29)
A [auth B]SCOP2B SuperfamilyPepMV Coat protein-like 8089914 3002401 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth A]Tospo_nucleocape5ip3A1 A: alpha complex topologyX: Leanyer virus nucleoprotein-related (From Topology)H: Leanyer virus nucleoprotein-related (From Topology)T: Leanyer virus nucleoprotein-relatedF: Tospo_nucleocapECOD (1.6)
B [auth C]Tospo_nucleocape5ip3C1 A: alpha complex topologyX: Leanyer virus nucleoprotein-related (From Topology)H: Leanyer virus nucleoprotein-related (From Topology)T: Leanyer virus nucleoprotein-relatedF: Tospo_nucleocapECOD (1.6)
A [auth B]Tospo_nucleocape5ip3B1 A: alpha complex topologyX: Leanyer virus nucleoprotein-related (From Topology)H: Leanyer virus nucleoprotein-related (From Topology)T: Leanyer virus nucleoprotein-relatedF: Tospo_nucleocapECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
DNA (5'-D(P*TP*TP*TP*TP*TP*T)-3')---
DNA (5'-D(P*TP*TP*TP*TP*TP*TP*T)-3')---
DNA (5'-D(P*TP*TP*TP*TP*T)-3')---
A [auth B],
B [auth C],
C [auth A]		Nucleoprotein -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth B],
B [auth C],
C [auth A]		IPR002517Tospovirus nucleocapsid proteinFamily