5IL9 | pdb_00005il9

Crystal structure of Deg9


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BPAS_9e5il9B1 A: a/b three-layered sandwichesX: Ntn/PP2CH: NtnT: Penicillin acylase, catalytic domainF: PAS_9ECOD (v294.1)
APAS_9e5il9A1 A: a/b three-layered sandwichesX: Ntn/PP2CH: NtnT: Penicillin acylase, catalytic domainF: PAS_9ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.20.190.20 Alpha Beta Alpha-Beta Barrel N-terminal domain of MutM-like DNA repair proteins CATH (4.3.0)
A3.20.190.20 Alpha Beta Alpha-Beta Barrel N-terminal domain of MutM-like DNA repair proteins CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF13180PDZ domain (PDZ_2)PDZ domainDomain
A, B
PF17815PDZ domain (PDZ_3)PDZ domainThis entry contains the second PDZ domain from plant peptidases such as Deg2 [1]. This domain is involved in cage assembly. Domain
A, B
PF13365Trypsin-like peptidase domain (Trypsin_2)Trypsin-like peptidase domainThis family includes trypsin-like peptidase domains. Domain

InterPro: Protein Family Classification InterPro Database Homepage