Crystal structure of bovine Fab B11
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A [auth L] | d5ihul1 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | automated matches | automated matches | (Bos taurus ) [TaxId: 9913 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A [auth L] | C1-set | e5ihuL1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set | ECOD (1.6) |
| B [auth H] | V-set_8 | e5ihuH2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
| B [auth H] | C1-set_1 | e5ihuH1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A [auth L] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
| B [auth H] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
| Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
|---|---|---|---|---|---|---|---|---|
| A [auth L] | Fab B11 | null | Bos taurus (bovine) | - | - | IG | VH-CH1 | IMGT (202547-0) |
| B [auth H] | Fab B11 | VH-CH1 | Bos taurus (bovine) | IGHV1-7*02, IGHJ2-4*01, IGHG1*02 | V-DOMAIN VH, C-DOMAIN CH1 | IG | VH-CH1 | IMGT (202547-0) |
SAbDab Antibody Annotation SAbDab Database Homepage
| Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
|---|---|---|---|---|---|
| A [auth L] | Light Chain | IGLV1 | Lambda | - | SAbDab (2025-12-05) |
| B [auth H] | Heavy Chain | IGHV1 | - | - | SAbDab (2025-12-05) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| A [auth L] | PF07686 | Immunoglobulin V-set domain (V-set) | Immunoglobulin V-set domain | This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. | Domain |
| A [auth L] | PF07654 | Immunoglobulin C1-set domain (C1-set) | Immunoglobulin C1-set domain | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| A [auth L] | bovine Fab B11 light chain | - | - | |
| B [auth H] | bovine Fab B11 heavy chain | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| A [auth L] | IPR003597 | Immunoglobulin C1-set | Domain |
| A [auth L] | IPR050150 | Immunoglobulin Variable Light Chain | Family |
| A [auth L] | IPR013783 | Immunoglobulin-like fold | Homologous Superfamily |
| A [auth L] | IPR036179 | Immunoglobulin-like domain superfamily | Homologous Superfamily |
| A [auth L] | IPR013106 | Immunoglobulin V-set domain | Domain |
| A [auth L] | IPR003599 | Immunoglobulin domain subtype | Domain |
| A [auth L] | IPR007110 | Immunoglobulin-like domain | Domain |
| A [auth L] | IPR003006 | Immunoglobulin/major histocompatibility complex, conserved site | Conserved Site |
