5IC8 | pdb_00005ic8

Structure of UTP6

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	TPR_11_6	e5ic8D1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: TPR_11_6	ECOD (1.6)
C	TPR_11_6	e5ic8C1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: TPR_11_6	ECOD (1.6)
B	TPR_11_6	e5ic8B1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: TPR_11_6	ECOD (1.6)
A	TPR_11_6	e5ic8A1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: TPR_11_6	ECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Putative uncharacterized protein	RNA binding binding snoRNA binding nucleic acid binding	RNA splicing RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process biosynthetic process metabolic process cellular process RNA processing RNA splicing RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process biosynthetic process metabolic process cellular process RNA processing macromolecule metabolic process ribonucleoprotein complex biogenesis rRNA processing maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) cellular component biogenesis ribosome biogenesis maturation of SSU-rRNA cellular component organization or biogenesis rRNA metabolic process ribosomal small subunit biogenesis mRNA processing mRNA metabolic process	membrane-bounded organelle protein-containing complex preribosome intracellular anatomical structure Pwp2p-containing subcomplex of 90S preribosome nucleus membrane-enclosed lumen nuclear protein-containing complex intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen 90S preribosome intracellular organelle membrane-bounded organelle protein-containing complex preribosome intracellular anatomical structure Pwp2p-containing subcomplex of 90S preribosome nucleus membrane-enclosed lumen nuclear protein-containing complex intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen 90S preribosome intracellular organelle cellular anatomical structure organelle lumen organelle ribonucleoprotein complex membraneless organelle nuclear lumen small-subunit processome spliceosomal complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR003107	HAT (Half-A-TPR) repeat	Repeat
A, B, C, D	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
A, B, C, D	IPR013949	U3 small nucleolar RNA-associated protein 6	Family
A, B, C, D	IPR055347	U3 small nucleolar RNA-associated protein 6, N-terminal	Domain
A, B, C, D	IPR055433	Pre-mRNA-splicing factor Syf1-like, N-terminal HAT-repeats domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.